Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0330
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.0  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 439 NHEFYNSSFIGNAMFFNEYW 498
           NH+ YNS+ + N   +  Y+
Sbjct: 66  NHQNYNSNVLSNGYGYGNYY 85


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 439 NHEFYNSSFIGNAMFFNEYW 498
           NH+ YNS+ + N   +  Y+
Sbjct: 66  NHQNYNSNVLSNGYGYGNYY 85


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 254 P*LRFHFWA*TAPASSRSLRPRTRTKSANLSTLTLITI 367
           P   FH    T  ASSR + PR + K+  + TL ++ +
Sbjct: 258 PPRHFHEEHDTRRASSRGIIPRAKIKTVKM-TLVIVFV 294


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 439 NHEFYNSSFIGNAMFFNEYW 498
           NH+ YNS+ + N   +  Y+
Sbjct: 66  NHQNYNSNVLSNGYGYGNYY 85


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 439 NHEFYNSSFIGNAMFFNEYW 498
           NH+ YNS+ + N   +  Y+
Sbjct: 66  NHQNYNSNVLSNGYGYGNYY 85


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/59 (20%), Positives = 26/59 (44%)
 Frame = +1

Query: 319 NTHKVSEPIDPDPDYDMRDISNFTPDKIKAEHNITDLTIDNHEFYNSSFIGNAMFFNEY 495
           N  K  E I    ++D++ +SN+T  + K    +  + +  +  ++   +     FN Y
Sbjct: 461 NRWKFIEFIRKVLEFDVKCVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVLRVQRFNNY 519


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 234 RSISNIGNSGVILDDLVHLC 175
           R   N+   G  ++DL+H C
Sbjct: 424 RDSYNLAGMGETIEDLLHFC 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,924
Number of Sequences: 336
Number of extensions: 3517
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)