Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0330
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    25   1.9  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    25   3.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.6  

>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 437 TITSSTTVPSSATLCFSTS 493
           T T++TT P++AT C ST+
Sbjct: 298 TTTTTTTTPTTATACPSTT 316


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 337 EPIDPDPDYDMRDISNFTPDKIKAEHNITDLTIDNH 444
           E I P P+YDM +IS   P+ I      +D+T +++
Sbjct: 194 ESIVPHPEYDMHNISR--PNDICILRLASDVTFNDY 227


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 731 RW*AKCRS*PSTEQCIA*RPTSCERAR 651
           RW   CRS P+  +  + RPTS  R+R
Sbjct: 267 RW-PSCRSPPARRRSRSTRPTSWPRSR 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,283
Number of Sequences: 2352
Number of extensions: 14375
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)