Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0328
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 279 2e-75
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 279 2e-75
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 115 3e-26
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 115 3e-26
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 102 3e-22
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 99 4e-21
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 94 1e-19
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 94 1e-19
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 86 2e-17
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 86 3e-17
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 84 9e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 77 1e-14
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 75 4e-14
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 72 4e-13
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 66 3e-11
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 63 2e-10
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 62 3e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 62 4e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 61 7e-10
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 60 1e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 50 1e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.003
AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine re... 31 1.2
AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical... 30 2.0
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 2.7
Z70718-9|CAA94678.2| 371|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL034365-2|CAA22257.1| 366|Caenorhabditis elegans Hypothetical ... 29 3.5
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 28 6.2
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 279 bits (684), Expect = 2e-75
Identities = 116/146 (79%), Positives = 135/146 (92%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 497
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 498 NEPNVKDPAQAEAYTIYCQNRLEYDK 575
N PN++DPAQAEAY IYCQNR EY+K
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEK 146
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 279 bits (684), Expect = 2e-75
Identities = 116/146 (79%), Positives = 135/146 (92%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 497
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 498 NEPNVKDPAQAEAYTIYCQNRLEYDK 575
N PN++DPAQAEAY IYCQNR EY+K
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEK 146
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 115 bits (277), Expect = 3e-26
Identities = 56/139 (40%), Positives = 81/139 (58%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 339 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKD 518
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+EPN
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 519 PAQAEAYTIYCQNRLEYDK 575
PA + A +Y +NR EY+K
Sbjct: 121 PANSLAAQLYQENRREYEK 139
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 115 bits (277), Expect = 3e-26
Identities = 56/139 (40%), Positives = 81/139 (58%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 339 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKD 518
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+EPN
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 519 PAQAEAYTIYCQNRLEYDK 575
PA + A +Y +NR EY+K
Sbjct: 121 PANSLAAQLYQENRREYEK 139
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 102 bits (244), Expect = 3e-22
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
M+G A RL E K P G +A P+ N WEC I G + T + G++
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDED----NFFEWECLITGPEETCFANGVFPA 56
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITI 464
R+ F DYP SPPK +F +FHPN+Y G VC+S+L D W P +I
Sbjct: 57 RITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSI 116
Query: 465 KQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
++ILL + +L EPN + PA A ++ ++R +++K
Sbjct: 117 EKILLSVVSMLAEPNDESPANVSAAKMWREDRAQFEK 153
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 98.7 bits (235), Expect = 4e-21
Identities = 48/135 (35%), Positives = 79/135 (58%)
Frame = +3
Query: 168 EERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPS 347
EE+ W + P G+ A+P+ +G+ +W C +PG +G+PWEGG Y++ + F +P
Sbjct: 42 EEKAKWDERTPQGYTAKPISF-EGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPI 99
Query: 348 SPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQ 527
PP C+F+ PL HPNV G++ L +L++E W ++K++L I +LL P++ A
Sbjct: 100 IPPICEFKTPLHHPNVDLRGSIYLKMLEQE-HWSSETSLKKLLREISNLLATPDLTQAAN 158
Query: 528 AEAYTIYCQNRLEYD 572
EA+ Y R Y+
Sbjct: 159 IEAWMEYENQRENYE 173
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/143 (34%), Positives = 78/143 (54%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYDK 575
N DP E IY +R Y++
Sbjct: 114 NPDDPLVPEIARIYKTDRERYNQ 136
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/143 (34%), Positives = 78/143 (54%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYDK 575
N DP E IY +R Y++
Sbjct: 114 NPDDPLVPEIARIYKTDRERYNQ 136
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
NL W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 426 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 548
L D W P +++ ILL + LLNEPN PA +A +Y
Sbjct: 98 LHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMY 149
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 85.8 bits (203), Expect = 3e-17
Identities = 47/143 (32%), Positives = 75/143 (52%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
M+G R+ +E + D G A NPD S N + I G +P+ GG++KL
Sbjct: 1 MAGQLPRRIIKETQRLLADPVPGISA----NPDES-NARYFHVMIAGPDDSPFAGGVFKL 55
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 497
+ ++YP + PK +F ++HPN+ G +CL +L ++ W PA+ I+ +LL IQ LL
Sbjct: 56 ELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK--WSPALQIRTVLLSIQALL 113
Query: 498 NEPNVKDPAQAEAYTIYCQNRLE 566
+ PN +DP + + N E
Sbjct: 114 SAPNPEDPLATDVAEQWKTNEAE 136
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 84.2 bits (199), Expect = 9e-17
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
++ WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 426 LDE-----------EKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 572
L + E+ W P T++ ILL + +L +PN + PA +A + +N E+
Sbjct: 92 LHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFK 151
Query: 573 K 575
K
Sbjct: 152 K 152
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +3
Query: 246 NLMTWECA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 422
NL+ W IP K+ P+ G +K+ + F DYP PPK FE ++HPNV G CL
Sbjct: 31 NLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Query: 423 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAE 533
++ E +W+PA +Q+++ + L+NEP P +A+
Sbjct: 89 IVTAE-NWKPATKTEQVMMALLSLINEPEPSHPIRAD 124
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 422
NL + I G TP+ GG++ L + D YP SPP KF ++HPNV +G +CL
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 423 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQA 530
+L ++ W ++T++ +LL IQ L+ P KDP A
Sbjct: 95 ILKDQ--WAASLTLRTVLLSIQALMCTPEPKDPQDA 128
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 72.1 bits (169), Expect = 4e-13
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
MS A+ RL +E + + P G + + N S +L W+ + G +GT + G ++ L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLL---VDNTSTSNDLKQWKIGVVGAEGTLYAGEVFML 57
Query: 318 RMIFKDDYPSSPPKCKF--EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQD 491
+ F YP + P+ F E HP++Y +G +CLS+L + DW PA++++ + L I
Sbjct: 58 QFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSD--DWTPALSVQSVCLSILS 115
Query: 492 LL-NEPNVKDPAQAEAYTIYC 551
+L + K P Y C
Sbjct: 116 MLSSSKEKKHPIDDAIYVRTC 136
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 446
I G + TP+EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 447 RPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
++TI ++L+ IQ ++ N K+P E NR ++K
Sbjct: 444 PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 285 GTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 461
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 462 IKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
++ +LL + LLNEP++ P +A Y N++E+ K
Sbjct: 113 MEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVK 150
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPL 380
NLM + I G +GTP+ GG +++++ + YP PPK KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 381 FHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQA 530
+HPN+ +GT+CL +L ++ W ++T++ +LL +Q +L P DP A
Sbjct: 109 WHPNISSQTGTICLDILKDK--WTASLTLRTVLLSLQAMLCSPEPSDPQDA 157
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +3
Query: 276 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 452
G K T +E G++++R+ D YP P F +FHPN+ SGTVCL ++++ W
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQA--WTA 98
Query: 453 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEY 569
+ I + LL PN DP EA +Y EY
Sbjct: 99 LYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEY 138
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 431
I G TP+ GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 432 ----EEKDWRPAITIKQILLGIQDLLNE 503
E+ W P ++ Q+L+ IQ+++ +
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVIEK 536
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 61.3 bits (142), Expect = 7e-10
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = +3
Query: 141 SGIASARLAEERKAWRK--DHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLY 311
SG+++ L +K +++ P F+ A P++ N++ W I G TP+EGG+Y
Sbjct: 3 SGVSTVALQRLKKDYQRLLKEPVPFMKAAPLET-----NILEWRYIIIGAPKTPYEGGIY 57
Query: 312 KLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-WRPAITIKQILLGIQ 488
+++F D+P PP P + + +CLS+ D D W PA T+ I+ G+
Sbjct: 58 MGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLM 115
Query: 489 DLLNE 503
+N+
Sbjct: 116 SFMND 120
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +3
Query: 141 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 320
S A RL ++ +D G A P N D N++ W + G TP+ GG Y +
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALP--NED---NILEWHYCLRGSPDTPFYGGYYWGK 71
Query: 321 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGIQDLL 497
+IFK+++P SPP P + + +CLS+ D + W P T+ IL+G+ +
Sbjct: 72 VIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFM 129
Query: 498 NE 503
NE
Sbjct: 130 NE 131
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = +3
Query: 294 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRPAIT 461
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 462 IKQILLGIQDLLNE-PNVKDPAQAEAYTIYCQNRLEYD 572
+ ++ G+ L N+ + D +A ++ QNR ++
Sbjct: 132 LTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFN 169
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
NL W I G GT +EGG+Y R+IF DYP PP P + + VCLS+
Sbjct: 37 NLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI 94
Query: 426 LD-EEKDWRPAITIKQILLGI 485
+ W P+ +I+ LL +
Sbjct: 95 SGYHPETWLPSWSIRTALLAL 115
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL EE + +K G ++ +++ D + L W +I G TP+E +Y L++ +
Sbjct: 9 RLLEELEEGQKGKGDGNISWGLED-DSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGN 67
Query: 339 YPSSPPKCKFEPPLFHPNVYPS-GTVCLSLLDEEKDWRPAITIKQILLGIQD--LLNEPN 509
YP PP +F + V S G + L ++W + IK +L I+ ++ + N
Sbjct: 68 YPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLEDIRKNMMMAKEN 127
Query: 510 VKDPAQAE 533
+K AE
Sbjct: 128 LKLQQPAE 135
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 404
I G TP+E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine
receptor, class h protein33 protein.
Length = 334
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -1
Query: 714 SVXLLF*SPVFTFILLFRQWLSSLTLHCPILIF 616
S +LF S +F + ++RQ+LS L + C ++I+
Sbjct: 110 SALILFTSRIFMIMNMYRQYLSHLRIFCELMIY 142
>AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical
protein C38C3.8 protein.
Length = 188
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 545 NCVGFSLRWIFYVRLIEKILNTQQNLLYCDCWTPIFFFIKQ*QAHRT*WIHIGVEQWWF 369
N GF +WI Y EK+ +T Q L++C PIF+ K+ + +++ E+ WF
Sbjct: 80 NDQGFWYQWIQYKNRYEKLNDTHQ-LVHCGDVFPIFW--KRVEGSLLGYVNSKTEEAWF 135
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 545 NCVGFSLRWIFYVRLIEKILNTQQNLLYCDCWTPIFFFIKQ*QAHRT*WIHIGVEQWWFK 366
N GF WI Y IEKI + + L+ C PIF+ K+ + + ++ E+ WF
Sbjct: 55 NNQGFWYEWIKYKDRIEKI-DDKHQLVRCGDSFPIFW--KRKEGNLLGYVDNKTEEGWFS 111
Query: 365 F 363
F
Sbjct: 112 F 112
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 545 NCVGFSLRWIFYVRLIEKILNTQQNLLYCDCWTPIFFFIKQ*QAHRT*WIHIGVEQWWFK 366
N GF WI Y IEKI + + L+ C PIF+ K+ + + ++ E+ WF
Sbjct: 90 NNQGFWYEWIKYKDRIEKI-DDKHQLVRCGDSFPIFW--KRKEGNLLGYVDNKTEEGWFS 146
Query: 365 F 363
F
Sbjct: 147 F 147
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 545 NCVGFSLRWIFYVRLIEKILNTQQNLLYCDCWTPIFFFIKQ*QAHRT*WIHIGVEQWWFK 366
N GF WI Y IEKI + + L+ C PIF+ K+ + + ++ E+ WF
Sbjct: 90 NNQGFWYEWIKYKDRIEKI-DDKHQLVRCGDSFPIFW--KRKEGNLLGYVDNKTEEGWFS 146
Query: 365 F 363
F
Sbjct: 147 F 147
>Z70718-9|CAA94678.2| 371|Caenorhabditis elegans Hypothetical
protein C04G2.9 protein.
Length = 371
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 545 NCVGFSLRWIFYVRLIEKILNTQQNLLYCDCWTPIFFFIKQ*QAHRT*WIHIGVEQWWFK 366
N GF WI Y IEKI + + L+ C PIF+ K+ + + ++ E+ WF
Sbjct: 87 NNQGFWYEWIKYKDRIEKI-DDKHQLVRCGDSFPIFW--KRAEGNLLGYVDNKTEEAWFS 143
Query: 365 F 363
F
Sbjct: 144 F 144
>AL034365-2|CAA22257.1| 366|Caenorhabditis elegans Hypothetical
protein Y69E1A.2 protein.
Length = 366
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 545 NCVGFSLRWIFYVRLIEKILNTQQNLLYCDCWTPIFFFIKQ*QAHRT*WIHIGVEQWWFK 366
N GF WI Y IEKI + + L+ C PIF+ K+ + + ++ E+ WF
Sbjct: 87 NNQGFWYEWIKYKDRIEKI-DDKHQLVRCGDSFPIFW--KRAEGNLLGYVDNKTEEAWFS 143
Query: 365 F 363
F
Sbjct: 144 F 144
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 399 PSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTI 545
P+ VC S KDW+P T+ + Q +L N DP AY I
Sbjct: 852 PATKVCRSFT--LKDWKPGNTVLTLSANHQYILISGNQSDPGVIYAYHI 898
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,507,357
Number of Sequences: 27780
Number of extensions: 370082
Number of successful extensions: 963
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -