Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0328
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 224 6e-59
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 119 2e-27
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 119 2e-27
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 119 2e-27
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 117 7e-27
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 104 5e-23
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 104 7e-23
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 103 1e-22
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 103 1e-22
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 102 3e-22
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 102 3e-22
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 102 3e-22
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 101 5e-22
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 101 5e-22
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 101 7e-22
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 100 9e-22
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 100 9e-22
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 99 2e-21
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 98 6e-21
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 97 1e-20
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 94 1e-19
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 89 2e-18
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 86 2e-17
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 85 6e-17
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 83 1e-16
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 83 3e-16
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 82 3e-16
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 82 3e-16
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 82 3e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 81 1e-15
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 78 5e-15
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 77 9e-15
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 75 4e-14
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 75 7e-14
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 73 2e-13
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 71 6e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 71 8e-13
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 71 8e-13
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 67 1e-11
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 62 5e-10
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 60 1e-09
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 57 1e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 56 3e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 56 3e-08
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 56 3e-08
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 53 2e-07
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 52 4e-07
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 2e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 48 9e-06
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 47 2e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 43 3e-04
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 42 3e-04
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 38 0.005
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 38 0.007
At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase famil... 31 0.62
At3g59700.1 68416.m06661 lectin protein kinase, putative similar... 30 1.4
At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase famil... 30 1.4
At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3) ident... 29 2.5
At1g33060.2 68414.m04076 no apical meristem (NAM) family protein... 29 2.5
At1g33060.1 68414.m04075 no apical meristem (NAM) family protein... 29 2.5
At3g05230.1 68416.m00571 signal peptidase subunit family protein... 28 5.8
At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ b... 28 7.6
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 224 bits (547), Expect = 6e-59
Identities = 95/145 (65%), Positives = 113/145 (77%)
Frame = +3
Query: 141 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 320
SGIA RLAEERK+WRK+HP GFVA+P DG++NLM W C IPGK GT WEGG + L
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLT 62
Query: 321 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLN 500
M F +DYPS PPKCKF FHPNVYPSGTVCLS+L+E+ WRPAIT+KQIL+GIQDLL+
Sbjct: 63 MHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLD 122
Query: 501 EPNVKDPAQAEAYTIYCQNRLEYDK 575
PN DPAQ + Y ++CQ+ +EY K
Sbjct: 123 TPNPADPAQTDGYHLFCQDPVEYKK 147
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 119 bits (286), Expect = 2e-27
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
M+ A RL + K +KD P G P N N+M W I G + TPW+GG +KL
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDN-----NIMHWNALIFGPEDTPWDGGTFKL 55
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 497
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + +L IQ LL
Sbjct: 56 TLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAVLTSIQSLL 113
Query: 498 NEPNVKDPAQAEAYTIYCQNRLEYDK 575
+PN PA AEA ++ +N+ EY++
Sbjct: 114 CDPNPDSPANAEAARLFSENKREYNR 139
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 119 bits (286), Expect = 2e-27
Identities = 56/146 (38%), Positives = 81/146 (55%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 497
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 498 NEPNVKDPAQAEAYTIYCQNRLEYDK 575
+PN PA +EA +Y +++ EY++
Sbjct: 114 CDPNPNSPANSEAARMYSESKREYNR 139
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 119 bits (286), Expect = 2e-27
Identities = 56/146 (38%), Positives = 81/146 (55%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 497
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 498 NEPNVKDPAQAEAYTIYCQNRLEYDK 575
+PN PA +EA +Y +++ EY++
Sbjct: 114 CDPNPNSPANSEAARMYSESKREYNR 139
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 117 bits (282), Expect = 7e-27
Identities = 55/146 (37%), Positives = 81/146 (55%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
MS A RL + K ++D P G P N N+M W I G TPW+GG +KL
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKL 55
Query: 318 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 497
+ F +DYP+ PP +F +FHPN+Y G++CL +L + W P + IL IQ LL
Sbjct: 56 SLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLL 113
Query: 498 NEPNVKDPAQAEAYTIYCQNRLEYDK 575
+PN PA +EA ++ +++ EY++
Sbjct: 114 CDPNPNSPANSEAARMFSESKREYNR 139
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 104 bits (250), Expect = 5e-23
Identities = 52/142 (36%), Positives = 80/142 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPNV +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 104 bits (249), Expect = 7e-23
Identities = 43/112 (38%), Positives = 70/112 (62%)
Frame = +3
Query: 240 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 419
S N+ W I G GTP+EGG++ L + F DYP PPK F+ P++HPN+ G++C+
Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICM 92
Query: 420 SLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
++L ++ W PA+ ++++LL I LL +PN DP E ++ NR ++D+
Sbjct: 93 NILKDK--WTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQ 142
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 103 bits (247), Expect = 1e-22
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 103 bits (247), Expect = 1e-22
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYE 135
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 102 bits (244), Expect = 3e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 85
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 86 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 143
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y ++ +Y+
Sbjct: 144 NPDDPLVPEIAHMYKTDKNKYE 165
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 102 bits (244), Expect = 3e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSDSPYSGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 102 bits (244), Expect = 3e-22
Identities = 50/142 (35%), Positives = 81/142 (57%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAE-----DMFHWQATIMGPPESPYAGGVFLVSIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F+ ++HPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y +R +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDRSKYE 135
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (242), Expect = 5e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 101 bits (242), Expect = 5e-22
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPSESPYAGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y ++ +Y+
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYE 135
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 101 bits (241), Expect = 7e-22
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRM 323
+AS R+ +E K +KD P + A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTI 55
Query: 324 IFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 503
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++LL I LL +
Sbjct: 56 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTD 113
Query: 504 PNVKDPAQAEAYTIYCQNRLEYD 572
PN DP E +Y +R +Y+
Sbjct: 114 PNPDDPLVPEIAHMYKTDRAKYE 136
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 9e-22
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E IY +R++Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYE 135
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (240), Expect = 9e-22
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E + ++D P A P + ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGD-----DMFQWQATIMGPADSPFAGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F ++HPN+ +G++CL +L E+ W PA+T+ ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E IY +R++Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDRVKYE 135
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 99 bits (238), Expect = 2e-21
Identities = 49/142 (34%), Positives = 79/142 (55%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+A+ R+ +E K ++D P A P G ++ W+ I G +P+ GG++ + +
Sbjct: 1 MATRRILKELKELQRDPPVSCSA----GPTGE-DMFHWQATIMGPNESPYSGGVFLVNIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F +FHPN+ +G +CL +L ++ W PA+TI ++LL I LL +P
Sbjct: 56 FPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E IY ++ +Y+
Sbjct: 114 NPDDPLVPEIAHIYKTDKTKYE 135
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 97.9 bits (233), Expect = 6e-21
Identities = 47/110 (42%), Positives = 64/110 (58%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDI 122
Query: 426 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K
Sbjct: 123 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW-SNQEEYRK 169
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 96.7 bits (230), Expect = 1e-20
Identities = 46/142 (32%), Positives = 77/142 (54%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R++ E + ++ P A P+ D + W+ I G +P+ GG++ + +
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEED----IFHWQATIMGPHDSPYSGGVFTVSID 56
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 506
F DYP PPK F+ ++HPN+ G++CL +L E+ W PA T ++LL I LL +P
Sbjct: 57 FSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDP 114
Query: 507 NVKDPAQAEAYTIYCQNRLEYD 572
N DP E +Y ++ +Y+
Sbjct: 115 NPNDPLVPEIAHLYKVDKSKYE 136
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/110 (41%), Positives = 63/110 (57%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDI 123
Query: 426 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
L ++ W A ++ ILL IQ LL EPN+ P +A ++ N+ EY K
Sbjct: 124 LQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW-SNQEEYRK 170
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 422
NL IPG GTP+EGG +++ + D YP PPK +F ++HPN+ SG +CL
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 423 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 557
+L ++ W PA+T+K L+ IQ LL+ P KDP A Y +N
Sbjct: 91 ILKDQ--WSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKN 133
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92
Query: 426 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 572
L D W P T++ I+L I +L+ PN + PA EA + + R E+
Sbjct: 93 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFK 152
Query: 573 K 575
K
Sbjct: 153 K 153
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 84.6 bits (200), Expect = 6e-17
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
Query: 426 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 572
L D W P T++ I+L I +L+ PN + PA EA + NR E+
Sbjct: 94 LHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFR 153
Query: 573 K 575
K
Sbjct: 154 K 154
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVY G VC+S+
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 426 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 572
L D W P T++ I+L I +L+ PN + PA EA + R E+
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 184
Query: 573 K 575
K
Sbjct: 185 K 185
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/115 (35%), Positives = 65/115 (56%)
Frame = +3
Query: 231 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 410
P G NL W I G GTP+EGG++ L +IF DYP PPK F+ ++H NV +G
Sbjct: 60 PKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGD 118
Query: 411 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
+ +++L + W PA+TI ++L I+ + +P PA +Y +R ++D+
Sbjct: 119 LSVNILRD--SWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDE 171
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 82.2 bits (194), Expect = 3e-16
Identities = 40/114 (35%), Positives = 64/114 (56%)
Frame = +3
Query: 147 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 326
+AS R+ +E K +KD P A P+ ++ W+ I G +P+ GG++ + +
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPAESPYSGGVFLVTIH 55
Query: 327 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 488
F DYP PPK F +FHPN+ +G++CL +L E+ W PA+TI ++ L Q
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVTLIFQ 107
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 426 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 521
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 426 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDP 521
L ++ W PA+ I+ +LL IQ LL+ PN DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +3
Query: 264 CA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 440
CA I G GTP+E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 441 DWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEY 569
DW P++ ++ +L ++ LL EP + +A + +N EY
Sbjct: 101 DWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEY 143
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 449
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 450 PAITIKQILLGIQDLLNEPNVKDP 521
PA+ I+ +LL IQ LL+ PN DP
Sbjct: 66 PALQIRTVLLSIQALLSAPNPDDP 89
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 78.2 bits (184), Expect = 5e-15
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
+S IA RL +E W+ + P GF R N L W + G GT + Y L
Sbjct: 12 LSKIACNRLQKELSEWQVNPPTGFKHRVTDN------LQKWVIEVTGAPGTLYANETYNL 65
Query: 318 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 494
++ F YP P+ F PP HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSM 123
Query: 495 L-NEPNVKDPAQAEAYTIYCQN 557
L + P + P + Y C+N
Sbjct: 124 LSSSPEKQRPTDNDRYVKNCKN 145
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 77.4 bits (182), Expect = 9e-15
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Frame = +3
Query: 153 SARLAEERKAWRKDHPFGFVARPMKNP-DGSLNLMTW---ECAIPGKKGTPWEGGLYKLR 320
S R+ +E K D P G + + +GS + T+ + I G + T + G++ L+
Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLK 67
Query: 321 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD--EEKDWRPAITIKQILLGIQDL 494
+ + YP PP F P++HPN+ SG +CL +L+ + W+P++ I +L ++ L
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLL 127
Query: 495 LNEPNVKDPAQAEAYTIYCQNRLEYD 572
L+EPN D E Y NR +D
Sbjct: 128 LSEPNPDDGLMCEVSREYKYNRQTFD 153
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 75.4 bits (177), Expect = 4e-14
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
+S IA RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIACNRLQKELSEWQLNPPTGF---RHKVTD---NLQKWTIDVTGAPGTLYANETYQL 65
Query: 318 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 494
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ + + I +
Sbjct: 66 QVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYD--SWSPAMTVNSVCISILSM 123
Query: 495 L-NEPNVKDPAQAEAYTIYCQN 557
L + P + PA + Y C+N
Sbjct: 124 LSSSPAKQRPADNDRYVKNCKN 145
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 74.5 bits (175), Expect = 7e-14
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
+S IA+ RL +E W+ + P GF K D NL W + G GT + Y+L
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGF---KHKVTD---NLQRWIIEVIGAPGTLYANDTYQL 65
Query: 318 RMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 494
++ F + YP P+ F P HP++Y +G +CL +L + W PA+T+ I + I +
Sbjct: 66 QVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYD--SWSPAMTVSSICISILSM 123
Query: 495 LNEPNVKD-PAQAEAYTIYCQN 557
L+ K P + Y C+N
Sbjct: 124 LSSSTEKQRPTDNDRYVKNCKN 145
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = +3
Query: 138 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 317
++ IA+ RL +E W+ + P GF R S NL W + G GT + Y+L
Sbjct: 12 LTKIATNRLQKEFMEWQTNPPSGFKHRV------SDNLQRWIIEVHGVPGTLYANETYQL 65
Query: 318 RMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 494
++ F + YP P+ F+ P HP++Y +G +CL +L + W PA+ + I L I +
Sbjct: 66 QVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYD--SWSPAMRLSSICLSILSM 123
Query: 495 LNEPNVKD-PAQAEAYTIYCQN 557
L+ +VK P + Y C++
Sbjct: 124 LSSSSVKQKPKDNDHYLKNCKH 145
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 422
N+ W I G TP+EGG+++L + YP PP+ +F +FHPNV + +G +CL
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLD 92
Query: 423 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEA 536
+L + W PA T++ + I L+ P P ++
Sbjct: 93 IL--KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDS 128
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/110 (30%), Positives = 55/110 (50%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ WE + G G P+E G++ + + YP PPK F+ +FHPN+ G + + +
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 426 LDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
L W A+TI +LL I +L+ P A +Y ++R Y+K
Sbjct: 118 LGSR--WSSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAYEK 165
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 70.9 bits (166), Expect = 8e-13
Identities = 36/109 (33%), Positives = 56/109 (51%)
Frame = +3
Query: 231 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 410
P+G +LM +E I +G + G + + YP PK K + ++HPN+ G
Sbjct: 54 PNGKNDLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGN 112
Query: 411 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQN 557
VCL++L E DW+P + I ++ G+ L EPN +DP EA + N
Sbjct: 113 VCLNILRE--DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDN 159
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +3
Query: 246 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 425
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 426 LDEEKDWRPAITIKQILL 479
L ++ W PA+ I+ +LL
Sbjct: 93 LKDK--WSPALQIRTVLL 108
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +3
Query: 276 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 452
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 453 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
+ + + LL PN DP EA + ++R Y++
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQ 137
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = +3
Query: 276 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 452
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 453 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 575
+ + + LL PN DP EA + ++R Y++
Sbjct: 96 MFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQ 137
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
R+ +E + KD P R ++ ++L+ I G +GTP+ GL+ + F D
Sbjct: 336 RIQDEWRILEKDLPEMIFVRAYES---RMDLL--RAVIIGAQGTPYHDGLFFFDIFFPDT 390
Query: 339 YPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDL 494
YPS+PP + +PN+Y G VCLSLL ++ + W P T+ Q+L+ IQ L
Sbjct: 391 YPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGL 450
Query: 495 L--NEPNVKDP 521
+ +P +P
Sbjct: 451 ILNQKPYFNEP 461
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 339 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 485
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLD---- 431
I G +GTP+ GL+ + F D YPS PPK + +PN+Y G VCLSL+
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTG 700
Query: 432 -EEKDWRP-AITIKQILLGIQDL-LNE-PNVKDP 521
+ + W P T+ Q+L+ IQ L LNE P +P
Sbjct: 701 KKREKWLPKESTMLQLLVSIQALILNEKPYYNEP 734
Score = 54.4 bits (125), Expect = 8e-08
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 428
I G +GTP+ GL+ + F D YPS PP + +PN+Y G VCLSLL
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG 366
Query: 429 DEEKDWRP-AITIKQILLGIQDL-LNE-PNVKDPAQAEA 536
+ W P T+ Q+L+ IQ L LNE P +P ++
Sbjct: 367 SAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQS 405
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSL 425
I G +GTP+ GL+ + F D YPS PP + +PN+Y G V +S+
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL +E +A K+ VARP N +++ W + G +GTP+ GG Y ++ F +
Sbjct: 9 RLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 339 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 485
YP PP P + +CLS+ D + W P ++ IL G+
Sbjct: 64 YPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGL 111
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 276 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 452
G + ++GG++K+++ + YP P F ++HPNV SG VCL ++++ W P
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ--TWSP 95
Query: 453 AITIKQILLG-IQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 572
+ + + LL PN DP EA ++ ++R Y+
Sbjct: 96 MFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYE 136
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL EE + K G V+ M + D L + +W I G T +EG +++L++ D
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDADDIL-MQSWTGTILGPHNTAYEGKIFQLKLFCGKD 73
Query: 339 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 512
YP SPP +F+ + V P +G V S +WR T++ +L+ + +++++ N
Sbjct: 74 YPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNR 133
Query: 513 K 515
K
Sbjct: 134 K 134
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL EE + K G V+ M + D + + +W I G T +EG +++L++ +
Sbjct: 15 RLLEELERGEKGIGDGTVSYGMDDAD-DIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKE 73
Query: 339 YPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAITIKQILLGI-QDLLNEPNV 512
YP SPP +F+ + V P +G V SL +WR T++ IL+ + ++++ N
Sbjct: 74 YPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNR 133
Query: 513 K 515
K
Sbjct: 134 K 134
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +3
Query: 270 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE--- 434
I G GTP++ GL+ DYPS PP + +PN+Y G VCLSLL+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTG 945
Query: 435 --EKDWRP-AITIKQILLGIQDLL 497
+ W P + +I Q+L+ +Q L+
Sbjct: 946 RGNEVWDPKSSSILQVLVSLQGLV 969
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.6 bits (108), Expect = 9e-06
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +3
Query: 267 AIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP--PLFHPNVYPSGTVCLSLLDE-- 434
A+ G GTP+ GL+ ++ YP PP + +PN+Y SG VCLSLL+
Sbjct: 697 ALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWS 756
Query: 435 ---EKDWRP-AITIKQILLGIQDL-LNE 503
+ W + +I Q+LL Q L LNE
Sbjct: 757 GSGTEVWNAGSSSILQLLLSFQALVLNE 784
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +3
Query: 150 ASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIF 329
A R+ +E K + + F++ P++ N+ W+ AI G T +EGG+Y R+
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQL 66
Query: 330 KDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGI 485
DYP PP P + + +CLS+ + + W+P+ +++ L+ +
Sbjct: 67 PADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVAL 117
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 74
Query: 339 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 476
YP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 YPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 121
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 338
RL EE + K G V+ M + D + + +W I G T EG +Y+L++ D
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKD 75
Query: 339 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 488
YP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 YPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 335
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 16 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 74
Query: 336 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQIL 476
DYP PP +F + V + +G V +W+ T++ IL
Sbjct: 75 DYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDIL 122
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 37.9 bits (84), Expect = 0.007
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKG-TPWEGGLYKLRMIFKD 335
RL EE + K G V+ M + D + + +W I G T EG +Y+L++
Sbjct: 17 RLLEELERGEKGIGDGTVSYGMDDGD-DIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDK 75
Query: 336 DYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 488
DYP PP +F + V + +G V +W+ T++ IL+ ++
Sbjct: 76 DYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 127
>At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 217
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 587 AGTCNGCC*VNIRIGQWSVNELSHCLKSSINVKTGD*NSNXTLFW-XLGYN 736
+G C G C V G+ + ++L L+SS V +GD N+N T+ W LG N
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVWLHLGVN 93
>At3g59700.1 68416.m06661 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 661
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 270 SHIPKSLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFS 133
+H+ ++N + + S+ A + +DG + KLS++ V LS+ +S
Sbjct: 146 NHVGININGLRSVASASAGYYDDKDGSFKKLSLISREVMRLSIVYS 191
>At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 94
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 587 AGTCNGCC*VNIRIGQWSVNELSHCLKSSINVKTGD*NSNXTLFW 721
+G C G C V G+ + ++L L+SS V +GD N+N T+ W
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVW 87
>At3g59740.1 68416.m06665 receptor lectin kinase 3 (lecRK3)
identical to receptor lectin kinase 3 [Arabidopsis
thaliana] gi|4100060|gb|AAD00733
Length = 659
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -1
Query: 270 SHIPKSLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFS 133
+H+ ++N + + S+ A + DG + KLS++ V LS+ +S
Sbjct: 140 NHVGININGLTSVASASAGYYDDEDGNFKKLSLISTKVMRLSIVYS 185
>At1g33060.2 68414.m04076 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 652
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 312 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 196
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At1g33060.1 68414.m04075 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 648
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 312 YTAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRD 196
Y + P +S F Q SH+ ++++ N + SR+NQRD
Sbjct: 452 YNVNQPEQSSFEQ-SHVDRNISPSNIFEFKARSRENQRD 489
>At3g05230.1 68416.m00571 signal peptidase subunit family protein
contains Pfam profile: PF04573 signal peptidase subunit
Length = 167
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 183 WRKDHPFGFVARPMKNPDGSLNLMT-WECAIPGKK 284
W F FVA + P SLN ++ W+ IP K+
Sbjct: 75 WNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKE 109
>At2g40470.1 68415.m04994 LOB domain protein 15 / lateral organ
boundaries domain protein 15 (LBD15) identical to
SP|Q8L5T5 LOB domain protein 15 {Arabidopsis thaliana};
similar to ASYMMETRIC LEAVES2 [Arabidopsis thaliana]
GI:19918971
Length = 224
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 159 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECA 269
++ E AW H + RPM P G+LN +T CA
Sbjct: 14 KIKREADAW--PHQMAGIRRPMSGPPGTLNTIT-PCA 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,603,913
Number of Sequences: 28952
Number of extensions: 342732
Number of successful extensions: 954
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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