Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0327
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122152-1|AAM52664.1|  121|Drosophila melanogaster LD05816p pro...   199   2e-51
AE014298-1489|AAF46617.1|  121|Drosophila melanogaster CG32672-P...   199   2e-51
AY069026-1|AAL39171.2|  158|Drosophila melanogaster AT01047p pro...   182   5e-46
AE014297-2401|AAF55459.1|  120|Drosophila melanogaster CG12334-P...   182   5e-46
AY058472-1|AAL13701.1|  449|Drosophila melanogaster GH27640p pro...    29   7.8  
AE013599-2080|AAF58122.2|  449|Drosophila melanogaster CG8195-PA...    29   7.8  

>AY122152-1|AAM52664.1|  121|Drosophila melanogaster LD05816p
           protein.
          Length = 121

 Score =  199 bits (486), Expect = 2e-51
 Identities = 92/111 (82%), Positives = 98/111 (88%)
 Frame = +3

Query: 75  KKNIHLRRERLRAKKSAGKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLIR 254
           K+     + R    K   KYPDRVPVIVEKAPKAR+GDLDKKKYLVPSDLTVGQFYFLIR
Sbjct: 6   KEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIR 65

Query: 255 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 407
           KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHH+ED+FLYIA+SDENVYG
Sbjct: 66  KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +2

Query: 59  MKFQYKEEHSFEKRKAEGEK 118
           MKFQYKEEH+FEKR+AEG+K
Sbjct: 1   MKFQYKEEHAFEKRRAEGDK 20


>AE014298-1489|AAF46617.1|  121|Drosophila melanogaster CG32672-PA
           protein.
          Length = 121

 Score =  199 bits (486), Expect = 2e-51
 Identities = 92/111 (82%), Positives = 98/111 (88%)
 Frame = +3

Query: 75  KKNIHLRRERLRAKKSAGKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFYFLIR 254
           K+     + R    K   KYPDRVPVIVEKAPKAR+GDLDKKKYLVPSDLTVGQFYFLIR
Sbjct: 6   KEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIR 65

Query: 255 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 407
           KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHH+ED+FLYIA+SDENVYG
Sbjct: 66  KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +2

Query: 59  MKFQYKEEHSFEKRKAEGEK 118
           MKFQYKEEH+FEKR+AEG+K
Sbjct: 1   MKFQYKEEHAFEKRRAEGDK 20


>AY069026-1|AAL39171.2|  158|Drosophila melanogaster AT01047p
           protein.
          Length = 158

 Score =  182 bits (442), Expect = 5e-46
 Identities = 84/115 (73%), Positives = 96/115 (83%)
 Frame = +3

Query: 63  NSNTKKNIHLRRERLRAKKSAGKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFY 242
           N   KK+    + R    K   KYPDRVPVIVEKAPK R  +LDKKKYLVP+DLTVGQFY
Sbjct: 42  NYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFY 101

Query: 243 FLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 407
           FLIRKRI+LRP+DALFFFVNNVIPPTSATMG+LYQEH D+D+FLYI+++DENVYG
Sbjct: 102 FLIRKRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 156



 Score = 35.5 bits (78), Expect = 0.068
 Identities = 12/22 (54%), Positives = 20/22 (90%)
 Frame = +2

Query: 53  INMKFQYKEEHSFEKRKAEGEK 118
           ++M +QYK++HSF+KR+ EG+K
Sbjct: 39  MDMNYQYKKDHSFDKRRNEGDK 60


>AE014297-2401|AAF55459.1|  120|Drosophila melanogaster CG12334-PA
           protein.
          Length = 120

 Score =  182 bits (442), Expect = 5e-46
 Identities = 84/115 (73%), Positives = 96/115 (83%)
 Frame = +3

Query: 63  NSNTKKNIHLRRERLRAKKSAGKYPDRVPVIVEKAPKARLGDLDKKKYLVPSDLTVGQFY 242
           N   KK+    + R    K   KYPDRVPVIVEKAPK R  +LDKKKYLVP+DLTVGQFY
Sbjct: 4   NYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFY 63

Query: 243 FLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 407
           FLIRKRI+LRP+DALFFFVNNVIPPTSATMG+LYQEH D+D+FLYI+++DENVYG
Sbjct: 64  FLIRKRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYG 118



 Score = 35.5 bits (78), Expect = 0.068
 Identities = 12/22 (54%), Positives = 20/22 (90%)
 Frame = +2

Query: 53  INMKFQYKEEHSFEKRKAEGEK 118
           ++M +QYK++HSF+KR+ EG+K
Sbjct: 1   MDMNYQYKKDHSFDKRRNEGDK 22


>AY058472-1|AAL13701.1|  449|Drosophila melanogaster GH27640p
           protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -1

Query: 194 VEVSKPSLRRFLYNYRNAIWIFXCGFFRPQPFSSQMNVLLCIGI 63
           V VS   L +FLYN  N    F C +F+   FS     LL IGI
Sbjct: 21  VWVSSSELTKFLYNEANFDKPFFCTYFKTSMFSI---YLLVIGI 61


>AE013599-2080|AAF58122.2|  449|Drosophila melanogaster CG8195-PA
           protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -1

Query: 194 VEVSKPSLRRFLYNYRNAIWIFXCGFFRPQPFSSQMNVLLCIGI 63
           V VS   L +FLYN  N    F C +F+   FS     LL IGI
Sbjct: 21  VWVSSSELTKFLYNEANFDKPFFCTYFKTSMFSI---YLLVIGI 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,969,521
Number of Sequences: 53049
Number of extensions: 546014
Number of successful extensions: 1234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)