Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0325
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.63 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.4  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   4.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 307 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 402
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 17/66 (25%), Positives = 24/66 (36%)
 Frame = +3

Query: 423  GQQREDDPDHVRNIQHARHVRXHPSRALAVRVRSYHRYRAGTPATVSPTPCPSTKDTHSP 602
            GQ    DP+ V   +   H+  HP +A     R Y+         +   PCPS    +  
Sbjct: 903  GQYTTKDPNEVTCDEEEGHISYHPDKA---DCRMYYMCEGERKHHM---PCPSNLVFNPD 956

Query: 603  TPSCVW 620
               C W
Sbjct: 957  QNVCDW 962


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 178 GTRREEHHLLRNRP 137
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 623 LARSPTSQTTSEDPHPE 673
           +A SPTS    E+P PE
Sbjct: 25  VAASPTSANPDEEPDPE 41


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 623 LARSPTSQTTSEDPHPE 673
           +A SPTS    E+P PE
Sbjct: 25  VAASPTSANPDEEPDPE 41


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 546 TPATVSPTPCPSTKDTHSPTPSCVWT*PGPR 638
           TP + + +P P  ++  SPTP  V T   PR
Sbjct: 38  TPNSAA-SPAPPEEEAASPTPGDVPTPSSPR 67


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 178 GTRREEHHLLRNRP 137
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 178 GTRREEHHLLRNRP 137
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 276 PDPQIPHRTRNRH 314
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 525 YHRYRAGTPATVSPTPCPSTKDTHSPTPS 611
           Y+ +   TP   SP     TKD  SPTPS
Sbjct: 27  YNIHHGATPPQ-SPNQ-QYTKDCSSPTPS 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 345 MPNLLHVIPVSDDSVFD 295
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 345 MPNLLHVIPVSDDSVFD 295
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 345 MPNLLHVIPVSDDSVFD 295
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 345 MPNLLHVIPVSDDSVFD 295
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,294
Number of Sequences: 336
Number of extensions: 4584
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)