Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0325
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 327 4e-90
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 327 4e-90
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 327 4e-90
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 327 4e-90
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 327 4e-90
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 327 4e-90
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 326 7e-90
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 325 2e-89
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 317 5e-87
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 289 2e-78
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 234 4e-62
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 195 2e-50
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 1e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 1e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 1e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 154 7e-38
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 126 1e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 94 8e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 2e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.091
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.21
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 30 1.5
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 30 1.5
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 28 5.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 327 bits (804), Expect = 4e-90
Identities = 151/154 (98%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 327 bits (804), Expect = 4e-90
Identities = 151/154 (98%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 327 bits (804), Expect = 4e-90
Identities = 151/154 (98%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 327 bits (804), Expect = 4e-90
Identities = 151/154 (98%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 327 bits (804), Expect = 4e-90
Identities = 151/154 (98%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 327 bits (804), Expect = 4e-90
Identities = 151/154 (98%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 326 bits (802), Expect = 7e-90
Identities = 151/154 (98%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 325 bits (798), Expect = 2e-89
Identities = 149/154 (96%), Positives = 153/154 (99%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 441
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
TQIMFETFNTPAMYVAIQAVLSLYA GRTTGIVL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 204
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 317 bits (779), Expect = 5e-87
Identities = 146/152 (96%), Positives = 150/152 (98%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 267
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 268 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 447
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 448 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
IMFETFNTPAMYV IQAVLSLYA GRTTGIVL
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVL 153
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
D+GDGV+HTVPIYEGYALPHAI RLDLA + + ERGY+FTTT
Sbjct: 154 DTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMK-ILTERGYTFTTT 203
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 289 bits (708), Expect = 2e-78
Identities = 133/136 (97%), Positives = 135/136 (99%)
Frame = +1
Query: 136 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 315
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 316 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 495
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 496 AVLSLYAXGRTTGIVL 543
AVLSLYA GRTTG+VL
Sbjct: 125 AVLSLYASGRTTGVVL 140
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 141 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 190
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 234 bits (573), Expect = 4e-62
Identities = 108/110 (98%), Positives = 109/110 (99%)
Frame = +1
Query: 214 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 393
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 394 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VL
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 110
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLARSPTSQTTSEDPHPERGYSFTTT 697
DSGDGV+HTVPIYEGYALPHAILRLDLA + + ERGYSFTTT
Sbjct: 111 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK-ILTERGYSFTTT 160
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 195 bits (476), Expect = 2e-50
Identities = 85/147 (57%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 285
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 286 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 462
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 463 FNTPAMYVAIQAVLSLYAXGRTTGIVL 543
FN PA+Y+ +QAVLSLYA GRTTG+VL
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVL 157
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLA 628
DSGDGV+H VPI +G+A+ HAI R+DLA
Sbjct: 158 DSGDGVTHAVPIVKGFAMKHAIQRMDLA 185
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 1e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKI 339
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 1e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKI 339
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDMEKI 339
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 1e-45
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 SKRGILTLKYPIEHGIVTNWDDM 330
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 154 bits (373), Expect = 7e-38
Identities = 76/149 (51%), Positives = 103/149 (69%), Gaps = 3/149 (2%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 279
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 280 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 456
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 457 ETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
E + ++YVA+QAVL+LYA G TG+V+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVV 157
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLA 628
DSGDGV+H P+YEG+AL H RLD+A
Sbjct: 158 DSGDGVTHICPVYEGFALHHLTRRLDIA 185
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 126 bits (305), Expect = 1e-29
Identities = 68/158 (43%), Positives = 90/158 (56%), Gaps = 13/158 (8%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 225
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 226 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 402
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 403 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 516
E PLN NRE +IMFE+FN P +Y+A+QAVL+L A
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTA 158
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILRLDLA 628
DSGDGV+H +P+ +GY + I + +A
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIA 203
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 94.3 bits (224), Expect = 8e-20
Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 264
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 265 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 399
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 400 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVL 543
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMV 176
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 545 DSGDGVSHTVPIYEGYALPHAILR 616
DSG + VP+++GYA+ HA+++
Sbjct: 177 DSGATQTSVVPVFDGYAVTHAVVK 200
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +1
Query: 97 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 276
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 456
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 457 ETF 465
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +1
Query: 97 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 276
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 456
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 457 ETF 465
+ F
Sbjct: 116 DYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.1 bits (82), Expect = 0.013
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 279
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 280 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 459
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 460 TFNTPAMYVAIQAVLSLYAXGRTTGIVLGLRRR 558
+ + Q L LYA TTG+V+ + R
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGER 331
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.030
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +3
Query: 177 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 356
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 357 Q*AACRPRGTPSPAH*GSPQPQG 425
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +3
Query: 189 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 368
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 369 CRPRGTPSPAH*GSPQPQG 425
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -1
Query: 410 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 231
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 230 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 87
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = +3
Query: 453 VRNIQHARHVRXHPSRALAVRVRSYHRYRAGTPATVSPTPCPSTKDTHSPTPSCVWT*PG 632
V+ + A H+ +R A R+ P+T S PS + HSPTP PG
Sbjct: 831 VQRPRDAAHISEVETRRSARRLARNSNNPTDEPSTSSGAAGPSNRPPHSPTPP-----PG 885
Query: 633 PRPHRLPLKILTRSAXTRSLPPAERENRS 719
+ R+ K T P + +R+
Sbjct: 886 NKRRRVDRKPKTEEPEQMETEPVDPVHRA 914
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = +3
Query: 453 VRNIQHARHVRXHPSRALAVRVRSYHRYRAGTPATVSPTPCPSTKDTHSPTPSCVWT*PG 632
V+ + A H+ +R A R+ P+T S PS + HSPTP PG
Sbjct: 831 VQRPRDAAHISEVETRRSARRLARNSNNPTDEPSTSSGAAGPSNRPPHSPTPP-----PG 885
Query: 633 PRPHRLPLKILTRSAXTRSLPPAERENRS 719
+ R+ K T P + +R+
Sbjct: 886 NKRRRVDRKPKTEEPEQMETEPVDPVHRA 914
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 268 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 113
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 268 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 113
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 521 PXAYSESTAWMATYMAGVLNVSNMIWVIFSLL 426
P S TAW+ GV N+ N + IFS+L
Sbjct: 286 PYGLSIGTAWIFLLAPGVYNILNQLASIFSML 317
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 136 KAGFAGDDAPRAVFPSIVGRPRHQG 210
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,653,727
Number of Sequences: 27780
Number of extensions: 465584
Number of successful extensions: 1977
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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