Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0322
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I2L7 Cluster: Putative uncharacterized protein PFI144...    33   5.7  
UniRef50_Q8EF57 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_Q8I2L7 Cluster: Putative uncharacterized protein PFI1440w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI1440w - Plasmodium falciparum
           (isolate 3D7)
          Length = 714

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -2

Query: 365 DFGAINRSSYDLFSENVVLFVFSMINSSRHLLSNNNTIFLN*GQLKV*KHNKMALSKKNK 186
           D    N  +Y + S N+    F  I  +++ LSN+     N  QL +   N+    +K K
Sbjct: 186 DMLVTNDITYHMCSNNIFFSFFQKIQMNKYELSNDGNNMKNSSQLTIITKNEKKTKRKKK 245

Query: 185 KRAK 174
           K+ K
Sbjct: 246 KKRK 249


>UniRef50_Q8EF57 Cluster: Putative uncharacterized protein; n=1;
           Shewanella oneidensis|Rep: Putative uncharacterized
           protein - Shewanella oneidensis
          Length = 278

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 699 NPQLYLGNFVFKIHKIDYKKIYSFKTTQVQMSHLPERTFLV 577
           NP +YL  F+ +   I + ++  FKT ++   HLPER  LV
Sbjct: 53  NPNIYLDLFLKQRDSIGHNELPLFKTGELIDGHLPERLTLV 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,561,877
Number of Sequences: 1657284
Number of extensions: 13263302
Number of successful extensions: 27149
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26712
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)