Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0322
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.0  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 135 CNSKFKNKNKFPLKV*NPKKIRNVLNLF*KKKKHDPSSQFKK 10
           CN K K   +  ++    K+ R+   L    KK+DP  Q+KK
Sbjct: 77  CNQKQKETAEKVIRHLTQKRARDWERL---SKKYDPQGQYKK 115


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +1

Query: 49  LEQI*NIANFFRIL 90
           +E++ NIAN++RIL
Sbjct: 217 VEELMNIANYYRIL 230


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 567 KSLLLKMCVRAGVTFAPVSF*MNKFF 644
           K L+ K C   G+ F P+    NK++
Sbjct: 757 KDLVAKRCEERGILFVPIP---NKYY 779


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 84  PKKIRNVLNLF*KKKKH 34
           PKKIR  ++ F  K KH
Sbjct: 154 PKKIRGKISSFFSKLKH 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,193
Number of Sequences: 336
Number of extensions: 3820
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)