Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0322
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 24 1.3
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 24 1.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 4.0
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 5.3
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 22 5.3
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 5.3
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 5.3
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 21 9.3
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 21 9.3
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 21 9.3
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -1
Query: 663 IHKIDYKKIYSFKTTQVQMSHLPERTFLVIMIY-HLINSDKMAEPAFSI-*TPCNDYEHL 490
+ ++D + YS+ + QM ++PE + + Y ++N D + + + P +D
Sbjct: 282 VMRVDASEEYSYLRLKGQMLYIPESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRD 341
Query: 489 IKTIFKKKERTYLIPLNEQFL 427
+ + ++ E Y + N + L
Sbjct: 342 LVLMSEQFEADYKLTRNLELL 362
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/81 (19%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -1
Query: 663 IHKIDYKKIYSFKTTQVQMSHLPERTFLVIMIY-HLINSDKMAEPAFSI-*TPCNDYEHL 490
+ ++D + YS+ + QM ++PE + + Y ++N D + + + P +D
Sbjct: 282 VMRVDASEEYSYLRLKGQMLYIPESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRD 341
Query: 489 IKTIFKKKERTYLIPLNEQFL 427
+ + ++ E Y + N + L
Sbjct: 342 LVLMSEQFEADYKLTRNLELL 362
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = +2
Query: 311 KQHFLKINRS*IDLSPRNPLYTKFYENRWSC 403
+++FL + ++ + RNP + +F+E+ + C
Sbjct: 409 EEYFLNLT---VENNRRNPWFVEFWEHHFQC 436
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 461 EPILYL*TSNSCIYNMNLGNSSNDFHKI*Y 372
EP + SNSC Y+ N N +N++ K+ Y
Sbjct: 300 EPKIISSLSNSCNYSNNYYN-NNNYKKLYY 328
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 347 DLSPRNPLYTKFYENRWSCFRDSYYIYKNCSFKGIR 454
D++ R P+ + + + F D YY F+G+R
Sbjct: 83 DINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMR 118
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 347 DLSPRNPLYTKFYENRWSCFRDSYYIYKNCSFKGIR 454
D++ R P+ + + + F D YY F+G+R
Sbjct: 84 DINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMR 119
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 347 DLSPRNPLYTKFYENRWSCFRDSYYIYKNCSFKGIR 454
D++ R P+ + + + F D YY F+G+R
Sbjct: 83 DINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMR 118
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 347 DLSPRNPLYTKFYENRWSCFRDSYYIYKNCSFKGIR 454
D++ R P+ + + + F D YY F+G+R
Sbjct: 83 DINKRAPMGFQGMRGKKASFDDEYYKRAPMGFQGMR 118
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 344 IDLSPRNPLYTKFYENR 394
ID+ PR P +KF +NR
Sbjct: 55 IDVPPRCPPGSKFIKNR 71
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
Frame = -2
Query: 635 IHSKRHR--CKCHTCPNA 588
+H + H CKCH C A
Sbjct: 34 MHIRTHTLPCKCHLCGKA 51
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 344 IDLSPRNPLYTKFYENR 394
ID+ PR P +KF +NR
Sbjct: 55 IDVPPRCPPGSKFIKNR 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,770
Number of Sequences: 438
Number of extensions: 4674
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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