Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0321
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1; ...   107   2e-22
UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1; ...    84   4e-15
UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ...    73   8e-12
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;...    69   1e-10
UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B homo...    67   4e-10
UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:...    66   7e-10
UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila melanogaster|...    64   5e-09
UniRef50_Q652R5 Cluster: Putative uncharacterized protein P0603C...    56   1e-06
UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2 pro...    49   1e-04
UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY0192...    42   0.012
UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa g...    37   0.46 
UniRef50_Q6QIS8 Cluster: Tail sheath protein gp18; n=1; Klebsiel...    35   2.5  
UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY0656...    34   3.3  

>UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma japonicum|Rep: Putative uncharacterized
           protein - Schistosoma japonicum (Blood fluke)
          Length = 102

 Score =  107 bits (258), Expect = 2e-22
 Identities = 52/77 (67%), Positives = 59/77 (76%)
 Frame = +2

Query: 128 SHSRGVSFPISE*RRALSTNAGTRKMVNYAWSGRSQGKP*WRTVAILTCKSIVGTGYRGE 307
           +H R VS P +  R + S    TRKMVNYAW+GRSQ K  WR+VA+LTCKS+V  GYRGE
Sbjct: 27  AHHRPVS-PAAPGRWSTSARVRTRKMVNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRGE 85

Query: 308 RLIEPSSSWFRPKFPSG 358
           RLIEPSSSWF PKFPSG
Sbjct: 86  RLIEPSSSWFPPKFPSG 102


>UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 108

 Score = 83.8 bits (198), Expect = 4e-15
 Identities = 40/49 (81%), Positives = 41/49 (83%)
 Frame = -2

Query: 323 MVRLVFRPYTQFRRSICTSESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 177
           MVRLVFRPYTQ RRSICTSE LR+S RVS  F L RHSSPSFGSQ LCS
Sbjct: 1   MVRLVFRPYTQIRRSICTSEPLRASTRVSSGFTLFRHSSPSFGSQQLCS 49


>UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 53

 Score = 72.9 bits (171), Expect = 8e-12
 Identities = 33/44 (75%), Positives = 34/44 (77%)
 Frame = -3

Query: 310 SFAPIPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPSICA 179
           SFAPIP  DDRFARQNRY PP  FPL S   GIVHHLSGP+ CA
Sbjct: 1   SFAPIPKFDDRFARQNRYEPPPEFPLASPYSGIVHHLSGPNRCA 44


>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 440

 Score = 68.9 bits (161), Expect = 1e-10
 Identities = 36/61 (59%), Positives = 40/61 (65%)
 Frame = -3

Query: 298 IPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPSICAQSAPSFTDWKRDASGVRKSR 119
           +  SDDRFARQ+RYGPP  FPL S  PGIVHHLSGP+  A+ AP      RD   VR  R
Sbjct: 115 LTGSDDRFARQDRYGPPPEFPLASPCPGIVHHLSGPNAYAR-APPPRRGGRDGPVVRPRR 173

Query: 118 T 116
           T
Sbjct: 174 T 174


>UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B
           homolog,; n=2; Mammalia|Rep: PREDICTED: similar to SH2-B
           homolog, - Monodelphis domestica
          Length = 394

 Score = 67.3 bits (157), Expect = 4e-10
 Identities = 39/69 (56%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = -3

Query: 364 QLS*GKLRTEPATRWF-D*SFAPIPS--SDDRFARQNRYGPPSGFPLTST*PGIVHHLSG 194
           QLS  KL     TRW  D    P  +  SDDRFARQ+RYGPP  FPL S  PGIVHHLSG
Sbjct: 28  QLS-SKLSYSGPTRWVPDSRVLPDTTMGSDDRFARQDRYGPPPEFPLASPCPGIVHHLSG 86

Query: 193 PSICAQSAP 167
           P+  A + P
Sbjct: 87  PNTHAHAPP 95


>UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:
           Predicted protein - Pichia stipitis (Yeast)
          Length = 81

 Score = 66.5 bits (155), Expect = 7e-10
 Identities = 30/41 (73%), Positives = 31/41 (75%)
 Frame = -3

Query: 310 SFAPIPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPS 188
           SFAPIP  DDRFARQNRY PP  FP  S   GIVHHLSGP+
Sbjct: 1   SFAPIPKFDDRFARQNRYEPPPEFPSASPYSGIVHHLSGPN 41


>UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila
           melanogaster|Rep: LD48059p - Drosophila melanogaster
           (Fruit fly)
          Length = 46

 Score = 63.7 bits (148), Expect = 5e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +1

Query: 178 EHKCWDPKDGELCLVRSKSGETLMEDRSDSDVQIDRRN 291
           EH C DPKDGEL L+R KSGETLMEDR+ SDVQID +N
Sbjct: 9   EHICCDPKDGELYLIRLKSGETLMEDRNSSDVQIDCQN 46


>UniRef50_Q652R5 Cluster: Putative uncharacterized protein
           P0603C10.50; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0603C10.50 - Oryza sativa subsp. japonica (Rice)
          Length = 248

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = -3

Query: 301 PIPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPSI 185
           PIP SD RF RQ R+ PP  FPLTS    I+HHLSGP +
Sbjct: 38  PIPKSDKRFVRQYRFEPPLDFPLTSPRSSIIHHLSGPDM 76



 Score = 40.7 bits (91), Expect = 0.037
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -1

Query: 360 YPEGNFGRNQLLDGSISLSPL 298
           YPEGNFG NQLLDGSI L P+
Sbjct: 19  YPEGNFGGNQLLDGSIGLIPI 39


>UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2
           protein; n=9; Monodelphis domestica|Rep: PREDICTED:
           similar to COL5A2 protein - Monodelphis domestica
          Length = 774

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = -3

Query: 286 DDRFARQNRYGPPSGFPLTST*PGIVH 206
           DDRFARQ+RYGPP  FPL S  PGIVH
Sbjct: 20  DDRFARQDRYGPPPEFPLASPCPGIVH 46


>UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY01927;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01927 - Plasmodium yoelii yoelii
          Length = 193

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = -1

Query: 348 NFGRNQLLDGSISLSPLYPVPTIDLHVRIATVLHQGFP*LRPDQA 214
           +F  NQL+  SISLSPL  +   DLHV I ++LHQ F  L+   A
Sbjct: 149 SFENNQLIGFSISLSPLNVIEMNDLHVSINSILHQAFTRLQSHHA 193


>UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa
           group|Rep: Predicted protein - Pichia stipitis (Yeast)
          Length = 94

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -1

Query: 474 GVLTHLKFENRLRSFRPQCL 415
           G+LT+LKFENRLRSF+PQ L
Sbjct: 75  GLLTYLKFENRLRSFQPQDL 94


>UniRef50_Q6QIS8 Cluster: Tail sheath protein gp18; n=1; Klebsiella
           phage KPP95|Rep: Tail sheath protein gp18 - Klebsiella
           phage KPP95
          Length = 657

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 22/64 (34%), Positives = 30/64 (46%)
 Frame = +2

Query: 416 RHWGRNDLNLFSNFKWVRTPAYSNDEAGDLMTVPSGPILVSRTGAVG*TKSSGQGQGHSY 595
           R   +N   L  N +W  T A SN E GD +TV     +V  TG+V    S G+ +    
Sbjct: 86  REAAKNASPLVDNIEWTITTAGSNYEVGDKITVKYADQVVDDTGSVTEVDSDGKIKSVFI 145

Query: 596 PFSQ 607
           P S+
Sbjct: 146 PTSK 149


>UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY06566;
           n=3; cellular organisms|Rep: Putative uncharacterized
           protein PY06566 - Plasmodium yoelii yoelii
          Length = 114

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = -1

Query: 357 PEGNFGRNQLLDGSISLSPLYPVPTIDLHV 268
           PE +F  NQL+  SISLSPL  +   DLHV
Sbjct: 45  PERSFENNQLIGFSISLSPLNVIEMNDLHV 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,275,595
Number of Sequences: 1657284
Number of extensions: 15417389
Number of successful extensions: 32433
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 31440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32429
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)