Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0321
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 43 2e-04
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 31 1.3
SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041) 30 1.7
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 29 5.3
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGFIVRVSRSSHPFKV 452
L R FGSS ASSAYQ WPT + H +SGF SR+S+ FKV
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGFNY-ASRTSYQFKV 57
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -3
Query: 265 NRYGPPSGFPLTST*PGIVHHLSGPSICA 179
NRY PP FPL S GIVHHLSGP+ CA
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 57 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 85
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 54 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 82
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 55 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 83
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 55 LNRAFGSSRIASSAYQKWPTSNSHSLSGF 83
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTKNSHSLSGF 45
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 96 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 124
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ WPT + H +SGF
Sbjct: 139 LNRAFGSSRIASSAYQKWPTRNSHSLSGF 167
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -2
Query: 266 ESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 177
ESLR+S RVS F L RHSSPSFGSQ + S
Sbjct: 35 ESLRASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R +GSS ASSAYQ WPT + H +SGF
Sbjct: 17 LNRAYGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -3
Query: 565 FGSSHSASSAYQNWPTWHRHQISGF 491
FGSS ASSAYQ WPT + H +SGF
Sbjct: 21 FGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSA Q WPT + H +SGF
Sbjct: 74 LNRAFGSSRIASSALQKWPTRNSHSLSGF 102
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQISGF 491
L R FGSS ASSAYQ PT + H +SGF
Sbjct: 17 LNRAFGSSRIASSAYQKGPTRNSHSLSGF 45
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPTWHRHQI 500
L R FGSS ASSAYQ WPT + H +
Sbjct: 17 LNRAFGSSRIASSAYQKWPTRNSHSL 42
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWPT 518
L R FGSS ASSAYQ WPT
Sbjct: 17 LNRAFGSSRIASSAYQKWPT 36
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -3
Query: 265 NRYGPPSGFPLTST*PGIVHH 203
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1
Query: 315 ISLSPLYPVPTIDLHVR 265
ISLSPLYP TIDLHVR
Sbjct: 38 ISLSPLYPNLTIDLHVR 54
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -3
Query: 571 R*FGSSHSASSAYQNWPTWHRHQISGF 491
R FGSS ASS YQN PT R GF
Sbjct: 76 RAFGSSRIASSGYQNGPTRTRIHCPGF 102
>SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041)
Length = 128
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +1
Query: 133 LPRRLVSNQ*MKARSEHKC----WDPKDGELCLVRSKSGETLMEDRSDSDVQID 282
L RR VSN + +++H+ + +DG+ V++K G++L++ D+DV ++
Sbjct: 29 LARRYVSNGKEQTKAKHETVSITFVDRDGDRQTVKAKVGDSLLDVAKDNDVDLE 82
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3
Query: 577 LTR*FGSSHSASSAYQNWP 521
L R FGSS ASSAYQN P
Sbjct: 17 LNRAFGSSRIASSAYQNGP 35
>SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17)
Length = 605
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 610 RTVRGTASQNNHPSIKKLFKEIMLLSIRTXNKLEQIISRV 729
R RG ++ + KKL +++M L I T KLE II V
Sbjct: 412 RKFRGILNKITPQNFKKLVEQVMNLEIDTAEKLEGIIDIV 451
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,372,998
Number of Sequences: 59808
Number of extensions: 470679
Number of successful extensions: 992
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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