Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0320
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   3.0  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   5.3  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/65 (21%), Positives = 31/65 (47%)
 Frame = +1

Query: 403 IRKRCASLVRRVRASSNTVLAMIANRLDCPYIRHCCNKHLSLINLTVTGMV*RWTIYIDL 582
           ++++    VRR +      L M+ +    PYI +   ++    N+T+  M   +T  +++
Sbjct: 144 LKRQSWCTVRRAKTII-ACLTMVGSVHSVPYIFYAGTQYSERSNVTICDMRKEYTSQMEI 202

Query: 583 FKILD 597
           F  +D
Sbjct: 203 FNYID 207


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
 Frame = +2

Query: 338 CPGFVAPRVC--LQWLVRIAFMRPYASGAHPWYA 433
           CP F     C   Q   RI F      GAHPW A
Sbjct: 89  CPKFSNSPTCGAQQLADRIYFGEETERGAHPWAA 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,391
Number of Sequences: 2352
Number of extensions: 16530
Number of successful extensions: 107
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)