Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0320
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X12530-1|CAA31046.1|  297|Homo sapiens protein ( Human mRNA for ...    30   9.1  
X07203-1|CAA30179.1|  297|Homo sapiens protein ( Human mRNA for ...    30   9.1  
M27394-1|AAA35581.1|  297|Homo sapiens cell surface antigen B1 p...    30   9.1  
L23419-1|AAA88911.1|  297|Homo sapiens differentiation antigen p...    30   9.1  
BC002807-1|AAH02807.1|  297|Homo sapiens membrane-spanning 4-dom...    30   9.1  
AL645465-2|CAI15030.1|  147|Homo sapiens chromosome 1 open readi...    30   9.1  

>X12530-1|CAA31046.1|  297|Homo sapiens protein ( Human mRNA for B
           lymphocyte antigen CD20 (B1, Bp35). ).
          Length = 297

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 575 MYIVHRYTIPVTVRLMRDRCLLQQCLI*GQSSLFAIMARTVLELARTLRTKDAHRLRM 402
           MYI+    +  T +  R +CL++  +I    SLFA ++  +L +   L  K +H L+M
Sbjct: 93  MYIISGSLLAATEKNSR-KCLVKGKMIMNSLSLFAAISGMILSIMDILNIKISHFLKM 149


>X07203-1|CAA30179.1|  297|Homo sapiens protein ( Human mRNA for
           CD20 receptor (S7). ).
          Length = 297

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 575 MYIVHRYTIPVTVRLMRDRCLLQQCLI*GQSSLFAIMARTVLELARTLRTKDAHRLRM 402
           MYI+    +  T +  R +CL++  +I    SLFA ++  +L +   L  K +H L+M
Sbjct: 93  MYIISGSLLAATEKNSR-KCLVKGKMIMNSLSLFAAISGMILSIMDILNIKISHFLKM 149


>M27394-1|AAA35581.1|  297|Homo sapiens cell surface antigen B1
           protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 575 MYIVHRYTIPVTVRLMRDRCLLQQCLI*GQSSLFAIMARTVLELARTLRTKDAHRLRM 402
           MYI+    +  T +  R +CL++  +I    SLFA ++  +L +   L  K +H L+M
Sbjct: 93  MYIISGSLLAATEKNSR-KCLVKGKMIMNSLSLFAAISGMILSIMDILNIKISHFLKM 149


>L23419-1|AAA88911.1|  297|Homo sapiens differentiation antigen
           protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 575 MYIVHRYTIPVTVRLMRDRCLLQQCLI*GQSSLFAIMARTVLELARTLRTKDAHRLRM 402
           MYI+    +  T +  R +CL++  +I    SLFA ++  +L +   L  K +H L+M
Sbjct: 93  MYIISGSLLAATEKNSR-KCLVKGKMIMNSLSLFAAISGMILSIMDILNIKISHFLKM 149


>BC002807-1|AAH02807.1|  297|Homo sapiens membrane-spanning
           4-domains, subfamily A, member 1 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 575 MYIVHRYTIPVTVRLMRDRCLLQQCLI*GQSSLFAIMARTVLELARTLRTKDAHRLRM 402
           MYI+    +  T +  R +CL++  +I    SLFA ++  +L +   L  K +H L+M
Sbjct: 93  MYIISGSLLAATEKNSR-KCLVKGKMIMNSLSLFAAISGMILSIMDILNIKISHFLKM 149


>AL645465-2|CAI15030.1|  147|Homo sapiens chromosome 1 open reading
           frame 100 protein.
          Length = 147

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 356 PRVCLQWLVRIAFMRPYASGAHPWYAECGLAPTRS*P*LQTDW 484
           P++  Q L+R   +R ++  A PWY E       S P  + DW
Sbjct: 68  PQLDQQTLIRYICLRRHSKPAEPWYKETTYRRDYSLPFYEIDW 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,246,218
Number of Sequences: 237096
Number of extensions: 2214104
Number of successful extensions: 3508
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3508
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)