Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0320
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071707-1|AAL49329.1| 1026|Drosophila melanogaster RH22885p pro...    30   2.6  
AE014298-2268|AAS65365.1| 1026|Drosophila melanogaster CG16952-P...    30   2.6  
AE014298-2267|AAS65364.1| 1026|Drosophila melanogaster CG16952-P...    30   2.6  
AE014298-2266|AAF48532.2| 1026|Drosophila melanogaster CG16952-P...    30   2.6  
EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki pro...    29   4.6  
BT010009-1|AAQ22478.1| 2051|Drosophila melanogaster RE22882p pro...    29   4.6  
AY051797-1|AAK93221.1|  514|Drosophila melanogaster LD31354p pro...    29   4.6  
AF106933-1|AAD09426.1| 2051|Drosophila melanogaster plexin B pro...    29   4.6  
AE014135-2|AAF59374.2| 2051|Drosophila melanogaster CG17245-PA p...    29   4.6  
AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-P...    29   4.6  

>AY071707-1|AAL49329.1| 1026|Drosophila melanogaster RH22885p
           protein.
          Length = 1026

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 269 TIHNVHAARSASSSIMLSGLC*GCPGFVAPRVCLQ 373
           TI +VH A  ++  +    L  GCPGF A R+CL+
Sbjct: 177 TIFSVHRAILSARCVYFRDLLAGCPGFGA-RICLE 210


>AE014298-2268|AAS65365.1| 1026|Drosophila melanogaster CG16952-PC,
           isoform C protein.
          Length = 1026

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 269 TIHNVHAARSASSSIMLSGLC*GCPGFVAPRVCLQ 373
           TI +VH A  ++  +    L  GCPGF A R+CL+
Sbjct: 177 TIFSVHRAILSARCVYFRDLLAGCPGFGA-RICLE 210


>AE014298-2267|AAS65364.1| 1026|Drosophila melanogaster CG16952-PB,
           isoform B protein.
          Length = 1026

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 269 TIHNVHAARSASSSIMLSGLC*GCPGFVAPRVCLQ 373
           TI +VH A  ++  +    L  GCPGF A R+CL+
Sbjct: 177 TIFSVHRAILSARCVYFRDLLAGCPGFGA-RICLE 210


>AE014298-2266|AAF48532.2| 1026|Drosophila melanogaster CG16952-PA,
           isoform A protein.
          Length = 1026

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 269 TIHNVHAARSASSSIMLSGLC*GCPGFVAPRVCLQ 373
           TI +VH A  ++  +    L  GCPGF A R+CL+
Sbjct: 177 TIFSVHRAILSARCVYFRDLLAGCPGFGA-RICLE 210


>EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki protein.
          Length = 2381

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 629  HRFKTMHRYYTSSILNKSMYIVHRYT 552
            H FK M RY+ S    K +Y +H ++
Sbjct: 1772 HEFKHMQRYHPSDFFTKKVYYIHDHS 1797


>BT010009-1|AAQ22478.1| 2051|Drosophila melanogaster RE22882p protein.
          Length = 2051

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +2

Query: 2    VGTKIYF-IHYIPYKLNKVYLFKRQVII-LMSDATSVLVFV 118
            VG  + F I Y+ Y LNK Y+F   +++ +++ A  V+VFV
Sbjct: 1355 VGRNLRFVIGYLKYDLNKPYVFSHALLVGILTVALLVVVFV 1395


>AY051797-1|AAK93221.1|  514|Drosophila melanogaster LD31354p
           protein.
          Length = 514

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 629 HRFKTMHRYYTSSILNKSMYIVHRYT 552
           H FK M RY+ S    K +Y +H ++
Sbjct: 212 HEFKHMQRYHPSDFFTKKVYYIHDHS 237


>AF106933-1|AAD09426.1| 2051|Drosophila melanogaster plexin B protein.
          Length = 2051

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +2

Query: 2    VGTKIYF-IHYIPYKLNKVYLFKRQVII-LMSDATSVLVFV 118
            VG  + F I Y+ Y LNK Y+F   +++ +++ A  V+VFV
Sbjct: 1355 VGRNLRFVIGYLKYDLNKPYVFSHALLVGILTVALLVVVFV 1395


>AE014135-2|AAF59374.2| 2051|Drosophila melanogaster CG17245-PA
            protein.
          Length = 2051

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +2

Query: 2    VGTKIYF-IHYIPYKLNKVYLFKRQVII-LMSDATSVLVFV 118
            VG  + F I Y+ Y LNK Y+F   +++ +++ A  V+VFV
Sbjct: 1355 VGRNLRFVIGYLKYDLNKPYVFSHALLVGILTVALLVVVFV 1395


>AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-PA
            protein.
          Length = 2355

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 629  HRFKTMHRYYTSSILNKSMYIVHRYT 552
            H FK M RY+ S    K +Y +H ++
Sbjct: 1746 HEFKHMQRYHPSDFFTKKVYYIHDHS 1771


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,238,950
Number of Sequences: 53049
Number of extensions: 659133
Number of successful extensions: 1476
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)