Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0319
(500 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 56 4e-09
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 28 0.91
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 3.7
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 26 3.7
SPBC14C8.04 |||acetolactate synthase regulatory unit|Schizosacch... 25 4.8
SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces po... 25 4.8
SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 6.4
SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr ... 25 8.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 8.4
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 25 8.4
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 55.6 bits (128), Expect = 4e-09
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Frame = +2
Query: 188 YRGIRYAEPPVGKLRFQPPKLIRQ-YKERVDASKEGPACPLPV---------PPTYYVDE 337
+ GIRYA+PPVGKLR++ P + Y D ++ CP P P + DE
Sbjct: 21 FTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFKTICPQPFYNNRKNQVRNPDFKYDE 80
Query: 338 DCLRINVYTPS-NNVSKPLPVIFYIHAG 418
DCL +N++ P+ ++ PV+++IH G
Sbjct: 81 DCLFLNIWVPAGEKPAEGWPVLYFIHGG 108
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.9 bits (59), Expect = 0.91
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 191 RGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPACPLPVPPTYYVDEDCLRINVYTPS 370
R + A+ P LR + ++KE ++S+ GP + + + + LR+N+Y PS
Sbjct: 246 RSVSNAKAPTSALR-----ALLEHKE--NSSQNGPLAENFATFSGHAESNALRLNIYFPS 298
Query: 371 N-NVSKPL 391
+ + SKPL
Sbjct: 299 SESPSKPL 306
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 3.7
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 221 GKLRFQPPKLIRQYKERVDASKEGPACPLPVPPTYYVDEDCLRINVYTPSNNVSKPLP 394
GK R +L+ +Y +K A P PVP + +V P NN+S P P
Sbjct: 496 GKPRTSVNRLVDRYNHTSSLNKVA-AAPAPVPKPVNLK------SVENPQNNISAPTP 546
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 3.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 395 VIFYIHAGAFYSMTGRSD 448
VIFY+H GA Y T R++
Sbjct: 140 VIFYVHGGAHYLSTVRTN 157
>SPBC14C8.04 |||acetolactate synthase regulatory
unit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 4.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 293 PACPLPVPPTYYVDEDCLRINVYTPSNNVSKPLPVIF 403
P C + PP V E I + TP N V +P +F
Sbjct: 37 PRCRIIEPPRATVPEAVSNIIMSTPFNRVQRPKRHVF 73
>SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 382 EASPCDILHSRRSVLLHDGQERPGRASLL 468
E C LH+ + LL G+ER G ++L
Sbjct: 264 ELDTCLCLHAEENALLEAGRERVGNNAIL 292
>SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 335
Score = 25.0 bits (52), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 222 GNYDSSPQN*FGNTKNALTR 281
GN +SPQ+ FG + +AL+R
Sbjct: 231 GNSSTSPQDNFGTSNSALSR 250
>SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 8 KMLLKLIFICAIVYYADAHKNNKRQTEQKPAEPDGPVTRSQSGS 139
K +LK+ IC ++ +AD+ + R T++ P T + S
Sbjct: 48 KHVLKITIICILILFADSVRRVVRVTKEYDLAIAAPSTTESARS 91
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 24.6 bits (51), Expect = 8.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 302 PLPVPPTYYVDEDCLRINVYTPSNNVSKPLP 394
PLP PP D + L ++ Y P + + P P
Sbjct: 838 PLPSPPP--ADFNSLNVDFYEPHSYLESPAP 866
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -3
Query: 279 ASTRSLYCRISFGGWN--RSFPTGGSAY 202
AS + + ISFGG+N PT SA+
Sbjct: 356 ASNTAAFSSISFGGFNSLNQLPTSSSAF 383
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,130,200
Number of Sequences: 5004
Number of extensions: 44586
Number of successful extensions: 125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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