Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0319
(500 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 59 2e-09
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 7e-09
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21) 52 4e-07
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 44 5e-05
SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4) 40 0.002
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 39 0.002
SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 38 0.004
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05) 38 0.006
SB_32070| Best HMM Match : RVT_1 (HMM E-Value=2.4e-15) 38 0.006
SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 36 0.014
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 36 0.014
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_18617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_56820| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93
SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027) 30 1.2
SB_14464| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 29 1.6
SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_36310| Best HMM Match : DEAD (HMM E-Value=1.4) 28 5.0
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_17096| Best HMM Match : Novirhabdo_Nv (HMM E-Value=2.4) 27 6.6
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 27 8.7
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 27 8.7
SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_12281| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Frame = +2
Query: 188 YRGIRYAEPPVGKLRFQPPKLIRQYKERV-DASKEGPACPLPVP----------PTYY-- 328
+ G+ YAEPPV LRF+ P R + + +A++ C PT+
Sbjct: 52 FLGVPYAEPPVKNLRFKGPIPPRSWAPSIYEATEFKDICTQSYRHYGGSINNAWPTFTEK 111
Query: 329 -VDEDCLRINVYTPSNNVSKP-LPVIFYIHAGAFYSMTGRSDLAGPHYLLDRXLXLVTI 499
EDCL +N+YTPS N PVIFYIH G F++ T D+ +L R + LVT+
Sbjct: 112 RFSEDCLYLNIYTPSINPDGTHYPVIFYIHGGGFFAGTPIRDVTPGEFLPLRGIVLVTV 170
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 57.2 bits (132), Expect = 7e-09
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 28/139 (20%)
Frame = +2
Query: 95 PAEPDGPVTRSQSGSFLG--SWMETRRG--KQFQAYRGIRYAEPPVGKLRFQPPKLIRQY 262
P+ + + ++ G LG + + +G ++ + GI YA+ P+G LRF+PP+ ++ +
Sbjct: 82 PSNTEDVIINTKYGKVLGLAQTLASAQGPARKINKFLGIPYAQQPIGDLRFKPPQPLKPW 141
Query: 263 KERV-DASKEGPAC----------------PLPVPPTYYVDEDCLRINVYTP-----SNN 376
KE++ +A+ G C P + EDCL +N+YTP S++
Sbjct: 142 KEKIYNATSFGNICVQSKLYFEFLKSSIRRTWPDFSKKNMREDCLNLNIYTPAWPDISDS 201
Query: 377 VS--KPLPVIFYIHAGAFY 427
V K PV+FYIH G++Y
Sbjct: 202 VQTRKAYPVLFYIHGGSYY 220
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 54.4 bits (125), Expect = 5e-08
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Frame = +2
Query: 116 VTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGP 295
V + SG +G + G + Y G+ +A+ RF+ P+ +KE A G
Sbjct: 24 VVTTTSGPIIGEIVSLSTGHTVRKYLGVPFAKAE----RFENPQPPTPWKEVKQAILPGK 79
Query: 296 ACP---LPVP--PTYYVDEDCLRINVYTPSNNVSKPLPVIFYIHAGAFYSMTGRS 445
CP +P+ T + EDCL ++VY P N + LPV+ +IH G F++ RS
Sbjct: 80 ICPQVEIPIAGQTTAIMSEDCLILDVYAP-NITNSSLPVMVFIHGGGFFAGGARS 133
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Frame = +2
Query: 11 MLLKLIFICAIVYYADAHKNNKRQTEQKPAEPDGPVTRSQSGSFLGSWMETRRGKQFQAY 190
+L +IF+ ++ K++ + ++ E + + G+ G+ R +
Sbjct: 1003 ILSTVIFVAVLIALLTQGKSS--ENDENDDEDSSILIATDGGTIRGT-----RNSNAWVF 1055
Query: 191 RGIRYAEPPVGKLRFQPPKLIRQ---YKERVDASKEGPACP-LPVPPTYYVDEDCLRINV 358
+GI YA+PP+ +R++PP ++ +A+ G CP L EDCL +NV
Sbjct: 1056 KGIPYAKPPINDMRWKPPFPCGHNHCWQGTFNAAFYGKVCPQLNSEDQVIGSEDCLYLNV 1115
Query: 359 YTPSNNVSKPLPVIFYIHAG 418
+TPS ++ + PV+ +IH G
Sbjct: 1116 WTPSVDIKQ--PVLVFIHGG 1133
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 52.0 bits (119), Expect = 3e-07
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Frame = +2
Query: 83 TEQKPAEPDGPVTRSQSGSFLGSWME----TRRGKQFQAYRGIRYAEPPVGKLRFQPPKL 250
T+ AE ++ G GS + R K + + G+ YA PP+GKLRF PP+
Sbjct: 31 TDGSTAEAQSVTANTKYGEIKGSVVSYANSNGRVKSLKTFVGVPYASPPLGKLRFVPPRP 90
Query: 251 IRQYKERV-DASKEGPAC----------------PLPVPPTYYVDEDCLRINVYTPSN-N 376
+ + R+ +A++ G C P P + EDCL +N+ P
Sbjct: 91 PKSWSPRIYEATRYGNVCLQDTSKRILSSIKTLIPGIADPAAMLSEDCLYLNIVEPGEPP 150
Query: 377 VSKPLPVIFYIHAGAFYSMTGRSDLAGPHYLLDRXLXLVTI 499
+S PV+ YI G YS D G H L + + +V+I
Sbjct: 151 ISDKYPVMVYI-PGQDYSSGTSLDSLG-HALALKEVVVVSI 189
>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
Length = 424
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 116 VTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGP 295
+ +++SG+ G T G + +R IRYAE P+G LRF K +R + DA++ GP
Sbjct: 52 IVQTKSGAVEGRLEPTFHGLCTRQFRAIRYAEAPIGDLRFAKSKPVRSWNGVKDATQHGP 111
Query: 296 ACP 304
CP
Sbjct: 112 ICP 114
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 107 DGPVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASK 286
D V ++ +G+ G G Q + +R I YA+PPVGKLRF P + + DA++
Sbjct: 37 DHLVVQTLAGAVRGRLNPVVHGLQVRQFRAIPYAQPPVGKLRFAAPLPAKPWSGVRDATQ 96
Query: 287 EGPACP 304
GP CP
Sbjct: 97 HGPVCP 102
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 335 EDCLRINVYTPSN-NVSKPLPVIFYIHAGAFYSMTGR 442
EDCL I+VYTP N + K V+ +IH G F S R
Sbjct: 157 EDCLTISVYTPQNSDPDKQRAVMVFIHGGGFTSGASR 193
>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/111 (30%), Positives = 50/111 (45%)
Frame = +2
Query: 116 VTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGP 295
V ++ G G + G + GI YA RF+ P+ ++ + +DA
Sbjct: 33 VISTEYGPVRGLRHSLKNGNIAVKFLGIPYATAS----RFERPRNPAKWTQTLDAVNP-K 87
Query: 296 ACPLPVPPTYYVDEDCLRINVYTPSNNVSKPLPVIFYIHAGAFYSMTGRSD 448
CP VDE+CL +NVY PS + LPV+ +IH GAF + D
Sbjct: 88 VCPQTGEQV--VDENCLTLNVYKPSATRNSSLPVLVFIHGGAFMRFSAHED 136
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 44.4 bits (100), Expect = 5e-05
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +2
Query: 188 YRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPACPLPVPP---------TYYVDED 340
+ GI +A PPV KLRF PP + + DA+ C P ++ +D
Sbjct: 58 FLGIPFASPPVKKLRFSPPVPPEPWDDVYDATNFKAMC-FQDPEYNRMFWTGFSWRQSDD 116
Query: 341 CLRINVYTPSNNVSKPLPVIFYIHAGAF 424
CL +N+Y P N+ V+ YIH G +
Sbjct: 117 CLYLNIYAP-NSTGTKYAVMVYIHGGGY 143
>SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Frame = +2
Query: 113 PVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEG 292
P+ ++ SG G + K + GI YA+ RF P+ + ++E ++A++
Sbjct: 30 PIYKTNSGPVRGRSVHLSSKKTVHEFLGIPYAKAE----RFAYPQKYK-WEETLEATQFT 84
Query: 293 PACPLPVPPT------YYVDEDCLRINVYTP---SNNVSKPLPVIFYIHAGAFYSMTGRS 445
CP V P+ Y E+CL +N++ P L V+ +I AG FYS
Sbjct: 85 KPCPQLVIPSKGAKTLYETTENCLNLNIFVPVKEGKTWKDSLAVVVWI-AGLFYSYGNAV 143
Query: 446 DLAGPHYLLDRXLXLVTI 499
++ G + + +VT+
Sbjct: 144 EMDGRFLASNEEVIVVTL 161
>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
Length = 195
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Frame = +2
Query: 113 PVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEG 292
PV + +G G + G + Y GI +A+ RF+ P + DA G
Sbjct: 26 PVVDTTNGPVRGLTVTLPTGHAVRRYMGIPFAKAE----RFKAPVDPTPWTSTRDAFVNG 81
Query: 293 PACPLPVPP------TYYVDEDCLRINVYTPSNNVSKPL-PVIFYIHAGAFYSMTGR 442
CP + T + EDCL ++++ P+N + + V+ +I+ GAF S R
Sbjct: 82 KMCPQDLTEYMEQFTTNDMSEDCLNLDMFVPNNTAAGAMKSVMVWIYGGAFVSGANR 138
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 329 VDEDCLRINVYTPSNN-VSKPLPVIFYIHAGAFYSMTG 439
+ EDCL +NV+ P+ +K LPV+ +IH G +Y +G
Sbjct: 169 MSEDCLFLNVFRPAGTKATKDLPVMVFIHGGGYYRGSG 206
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 173 KQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPAC 301
++ +++ GI +AEPP+G LRF P K + + +A K G C
Sbjct: 51 REAESFYGIPFAEPPIGDLRFVPSKPAKGWSGVRNARKPGARC 93
>SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 38.3 bits (85), Expect = 0.004
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +2
Query: 116 VTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGP 295
V + SG +G G + Y GI +A+ RF+ P+ ++ + ++
Sbjct: 24 VVNTTSGPIVGKIEPLATGHTVKKYLGIPFAKAE----RFENPQFPTPWRSKKWFNRGKY 79
Query: 296 ACPLPVP----PTYYVDEDCLRINVYTPSNNVSKPLPVIFYIHAGAFYSMTG 439
A + P T + EDCL +++Y P N + +PV+ +IH G+ YS G
Sbjct: 80 AHKVANPILGLTTELMSEDCLVLDIYAP-NITNSSIPVMVFIHGGS-YSFGG 129
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 329 VDEDCLRINVYTPSNNVSKPLPVIFYIHAGAFYSMT 436
+ EDCL +NVY P+ + LPV+ +IH G +Y T
Sbjct: 42 ISEDCLFLNVYRPT-KFNHKLPVMVWIHGGGYYHAT 76
>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
Length = 452
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +2
Query: 113 PVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEG 292
PV + +G G + G + Y GI +A+ RF+ P + +A G
Sbjct: 25 PVVDTTNGPVRGLTVTLPTGHAVRRYMGIPFAKAE----RFKAPVNPEPWTTTKNAFNFG 80
Query: 293 PACPLPVPP------TYYVDEDCLRINVYTPSNNVS 382
CP + P T + EDCL +NV+ P+N +
Sbjct: 81 KICPQAITPYTANFKTSEMSEDCLNLNVFVPNNTAA 116
>SB_32070| Best HMM Match : RVT_1 (HMM E-Value=2.4e-15)
Length = 345
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 173 KQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPAC 301
++ +++ GI +AEPP+G LRF P K + + +A K G C
Sbjct: 286 REAESFYGIPFAEPPIGDLRFVPSKPAKGWSGVRNARKPGARC 328
>SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 98 AEPDGPVTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVD 277
AE D +T Q G G G + + + GI YA PVG+LRF P+ ++ D
Sbjct: 6 AEQDVVITLEQ-GKIQGMREPVPGGYEVEIFLGIPYARAPVGELRFADPQPPLEWTGIRD 64
Query: 278 ASKEGPACP-LPVPPTY 325
A CP P P +
Sbjct: 65 AKSYRAVCPQAPFLPNF 81
>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 36.3 bits (80), Expect = 0.014
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +2
Query: 230 RFQPPKLIRQYKERVDASKEGPACPLPVPP------TYYVDEDCLRINVYTPSNNVSKPL 391
RF+ P + +A G CP + P T + EDCL +NV+ P+N + +
Sbjct: 10 RFKAPVNPEPWTTTKNAFNFGKICPQAITPYTANFKTSEMSEDCLNLNVFVPNNTAAGAM 69
Query: 392 -PVIFYIHAGAFYSMTGR 442
V+ +I+ G F + R
Sbjct: 70 KSVMVWIYGGGFMNGANR 87
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 36.3 bits (80), Expect = 0.014
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 335 EDCLRINVYTPSN-NVSKPLPVIFYIHAGAFYSMTGRSDLAGPHYLLDRXLXLVT 496
EDCL +NV+TP + N + LPV+ YI G F+ +D+ G ++ + +VT
Sbjct: 335 EDCLTLNVHTPHDANENSSLPVLVYI-GGDFFVAGSSNDVDGSVLASNQKVVVVT 388
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 36.3 bits (80), Expect = 0.014
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 311 VPPTYYVDEDCLRINVYTPSNNVSKPLPVIFYIHAGAFYSMTG 439
+P T V EDCL +N+Y P+++ + LPV+ ++H G Y +G
Sbjct: 499 IPDT--VSEDCLYLNIYRPAHSHHR-LPVMVWLHGGGNYVGSG 538
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 35.9 bits (79), Expect = 0.019
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Frame = +2
Query: 116 VTRSQSGSFLGSWMETRRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKE-G 292
V + G G + + K+ + GI YA RF PP+ + +K G
Sbjct: 34 VINTTYGPVEGKNVLLQTNKEVVQFLGIPYANAS----RFDPPEPPTSWHNDTRQTKTYG 89
Query: 293 PACPLPVPPT-YYVDED-----CLRINVYTPS----NNVSKPLPVIFYIHAGAF 424
+CP + +Y+D D CL +NV+ P+ N S PV+ ++ GAF
Sbjct: 90 KSCPQAMNSAPHYLDSDSISEYCLNLNVFVPNTTEFRNESASYPVMVWVQGGAF 143
>SB_18617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 206 AEPPVGKLRFQPPKLIRQYKERVDASKEGPACPLP 310
AEPPV +LRF PK + + +A++ CP P
Sbjct: 5 AEPPVDELRFASPKPPKYWNGIRNATEYSAVCPQP 39
>SB_56820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 30.3 bits (65), Expect = 0.93
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 170 GKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPACP-LPVPPTY 325
G + + + I YA PVG+LRF P+ ++ DA CP P P +
Sbjct: 8 GYEVEIFLEIPYARAPVGELRFADPQPPLEWTGIRDAKSYRAVCPQAPFLPNF 60
>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
Length = 2261
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = -2
Query: 457 PGQVAPARHGVERSGVNVKYHRERLRDIVTRSIHVDSQAVF-VDVVSGRDGQRAGRALFA 281
PG++ H ++ ++Y E+ + + +I D + + V + G + R
Sbjct: 1836 PGRLGDRGHSIKEMAATIRYAIEQEQKLQEETILEDKDFIVDLFVETAPSGMISNRGF-- 1893
Query: 280 RVNAFFVLPN*FWGLES*FPDRWLSVSYAPIGLELLSAT 164
+ L N G+ES PD W++++ + E LS T
Sbjct: 1894 -CDTIMDLANLTHGMES-LPDAWMNITQTQVTQEELSLT 1930
>SB_14464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 287 LCSRQRVLCIAELVLGAGIVVSRPVAQRILCPYRPGTAFRDVSPSMSPKMS 135
+C LC+ + +GA ++P P RP T SP+ +PK+S
Sbjct: 8 VCWSAITLCVCFIAIGAETTTAKPKTTSSPTPTRPNTT-ATTSPTPTPKLS 57
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 169 RKAVPGL*GHKIR*ATGRETTIPAPKTNSAIQRTR*REQRGPGLPSARPSH 321
R + PG + A + T A + A QR + Q PG+P RPSH
Sbjct: 573 RSSYPGYPSQSFQSAPNTQFTGAAALSQLAYQRNQQAMQGYPGMPPRRPSH 623
>SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 424 ERSGVNVKYHRERLRDIVTRSIHVDSQAVFVDVVSGRDGQRAGRALFARVN 272
+R + + ERLRDI+ R HV + F S D R +A+ ARVN
Sbjct: 157 DREVLRLVLTNERLRDILLRQEHVQYEHKFDGQRSNGDRMRTFKAM-ARVN 206
>SB_36310| Best HMM Match : DEAD (HMM E-Value=1.4)
Length = 1042
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +2
Query: 164 RRGKQFQAYRGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPACPLPVPPTYYVDEDC 343
+RG++ AY+G E P+ + + P+ + D+ ++ P P PP + DC
Sbjct: 975 KRGEKVGAYKGT-VVEVPLDAVLNRLPRHFPRAARPPDSPRDPPPITPPPPPVPWFPRDC 1033
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 134 GSFLGSWMETRRGKQFQAYRGIR---YAEPPVGKLRFQPPKLIRQYKERVDAS 283
G+ G++ RG+ FQA RG R + +P G+ F+P L R+ + R S
Sbjct: 594 GALRGTFRGRGRGRGFQAIRGARGRGFNDPTRGRHIFKPGSL-RRSRSRTSLS 645
>SB_17096| Best HMM Match : Novirhabdo_Nv (HMM E-Value=2.4)
Length = 211
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 258 CRISFGGWNRSFPTGGSAYLMP 193
C IS G W P G +YL P
Sbjct: 35 CEISSGNWGLEIPEGWGSYLRP 56
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 168 AESSSRPIGA*DTLSHRSGNYDSSPQN 248
+E +S I DT SH+ GN +S+ QN
Sbjct: 408 SEEASHFIKLLDTFSHKGGNIESAEQN 434
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 211 ATGRETTIPAPKTNSAIQRTR*REQRGPGLPSARPS 318
A R T PA K + + + T+ +QR P P+ +PS
Sbjct: 106 AQPRNPTSPAEKPHQSSKETQPVQQRNPAGPAKKPS 141
>SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 347 RINVYTPSNNVSKPLPVIFYIHAGAFYSMTG 439
R++ Y PS N +P +F H G TG
Sbjct: 804 RVSAYRPSTNTQVLIPALFRGHMGLLRDHTG 834
>SB_12281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2
Query: 254 RQYKERVDAS-----KEGPACPLPVPPTYYVDEDCLRINV 358
+ +K+R D S K + VPP Y ED LRIN+
Sbjct: 147 KDWKDRTDRSIDRYRKRDVRIRINVPPDMYTKEDFLRINI 186
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,753,081
Number of Sequences: 59808
Number of extensions: 362483
Number of successful extensions: 1109
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -