Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0316
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.62 
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    25   3.3  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   3.3  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   3.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.4  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   7.6  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 614  LHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHSAXPSARSG 736
            L+ +HL H +    H+  G EGV +  A    +A PS+ +G
Sbjct: 1309 LNSSHLHHHLHHGHHHHHGGEGVPMGPA----NAAPSSPAG 1345


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +3

Query: 141 ALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNE 269
           ++TG ++LK  KQ+L  +DG +    ++     D+  I++  E
Sbjct: 575 SVTGTKLLKKTKQQLEPLDGTLGWRRSHRPSLHDISIIDEEEE 617


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 646 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 533
           FN+   VC         S+ PG  +  T+ PT   LRP
Sbjct: 73  FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 646 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 533
           FN+   VC         S+ PG  +  T+ PT   LRP
Sbjct: 73  FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 646 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 533
           FN+   VC         S+ PG  +  T+ PT   LRP
Sbjct: 73  FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 646 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 533
           FN+   VC         S+ PG  +  T+ PT   LRP
Sbjct: 73  FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 646 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 533
           FN+   VC         S+ PG  +  T+ PT   LRP
Sbjct: 73  FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 646 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 533
           FN+   VC         S+ PG  +  T+ PT   LRP
Sbjct: 73  FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 422 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 333
           AD AA +RY   +  +  RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,626
Number of Sequences: 2352
Number of extensions: 19812
Number of successful extensions: 91
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)