Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0316
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   413   e-115
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   413   e-115
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   413   e-115
D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   408   e-114
AE014296-172|AAF47439.2|  977|Drosophila melanogaster CG9097-PB,...    31   1.3  
AY058370-1|AAL13599.1|  370|Drosophila melanogaster GH13855p pro...    31   2.2  
AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-P...    30   3.9  
AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-P...    30   3.9  
AY220742-1|AAO74887.1|  461|Drosophila melanogaster putative ETH...    29   6.8  
AF505864-1|AAO20967.1|  461|Drosophila melanogaster G-protein co...    29   6.8  
AE014297-2963|AAS65191.1|  461|Drosophila melanogaster CG5911-PB...    29   6.8  
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp...    29   8.9  
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,...    29   8.9  
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,...    29   8.9  

>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  413 bits (1018), Expect = e-115
 Identities = 190/236 (80%), Positives = 210/236 (88%)
 Frame = +3

Query: 3   LKRLNAPKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182
           LKRL APK  MLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR
Sbjct: 9   LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68

Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 362
           L+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 69  LVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKK 128

Query: 363 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 542
              G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRN
Sbjct: 129 TQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRN 188

Query: 543 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 710
           LGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG+
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGV 244


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  413 bits (1018), Expect = e-115
 Identities = 190/236 (80%), Positives = 210/236 (88%)
 Frame = +3

Query: 3   LKRLNAPKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182
           LKRL APK  MLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR
Sbjct: 9   LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68

Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 362
           L+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 69  LVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKK 128

Query: 363 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 542
              G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRN
Sbjct: 129 TQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRN 188

Query: 543 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 710
           LGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG+
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGV 244


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  413 bits (1018), Expect = e-115
 Identities = 190/236 (80%), Positives = 210/236 (88%)
 Frame = +3

Query: 3   LKRLNAPKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182
           LKRL APK  MLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV QR
Sbjct: 9   LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQR 68

Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 362
           L+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 69  LVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKK 128

Query: 363 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 542
              G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRN
Sbjct: 129 TQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRN 188

Query: 543 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 710
           LGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG+
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGV 244


>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  408 bits (1004), Expect = e-114
 Identities = 188/236 (79%), Positives = 208/236 (88%)
 Frame = +3

Query: 3   LKRLNAPKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 182
           LKRL APK  MLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV KIV QR
Sbjct: 9   LKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQR 68

Query: 183 LIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKR 362
           L+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 69  LVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKK 128

Query: 363 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRN 542
              G K VP+LVTHDGRTIRYPDPLI  NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRN
Sbjct: 129 TQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRN 188

Query: 543 LGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGI 710
           LGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG+
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGV 244


>AE014296-172|AAF47439.2|  977|Drosophila melanogaster CG9097-PB,
            isoform B protein.
          Length = 977

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +2

Query: 536  P*LGACGHHRVPRETSRLLRHCAHQGLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHS 712
            P +    HH+  ++ +       H      HL H + +Q+   +Q H+G H  A + G  
Sbjct: 802  PSMAVALHHQQQQQAAHHHMQQLHLQQQQAHLHHHQQQQQQQQQQHHQGGHQVAHKSGFG 861

Query: 713  AXPSARSGTSA 745
            A  S+ + +S+
Sbjct: 862  ASSSSSASSSS 872


>AY058370-1|AAL13599.1|  370|Drosophila melanogaster GH13855p
           protein.
          Length = 370

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 557 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH-LAAARQGHSAXPSARS 733
           HH +    S L  H  HQ  H +  +H+     H  Q    VH LA +    S  P  R 
Sbjct: 306 HHELTHGKSTLNGHQHHQHQHSSSGKHQGSGHGHREQQPHHVHSLATSTMASSRHPRDRH 365

Query: 734 G 736
           G
Sbjct: 366 G 366


>AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-PB,
           isoform B protein.
          Length = 2309

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 596 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHSAXPSARSGT 739
           H  HQ  H  H +H  +Q+ H+R  H G H    + GH +    R G+
Sbjct: 310 HHQHQQHHQQHQQHHHQQQQHHRDYHHG-H--GRQYGHHSHRDYRDGS 354


>AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-PA,
           isoform A protein.
          Length = 2309

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 596 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHSAXPSARSGT 739
           H  HQ  H  H +H  +Q+ H+R  H G H    + GH +    R G+
Sbjct: 310 HHQHQQHHQQHQQHHHQQQQHHRDYHHG-H--GRQYGHHSHRDYRDGS 354


>AY220742-1|AAO74887.1|  461|Drosophila melanogaster putative ETH
           receptor splicingvariant b protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 584 RLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHSAXPSARSGTSAS 748
           RLL  C  Q  H  H RH   QR H   G  G + +  ++  +   +A +GT+++
Sbjct: 332 RLLLTCLGQRPHHHH-RHHYHQRQHPTAGGSGRNASTRQEQDAEEGAALAGTTSA 385


>AF505864-1|AAO20967.1|  461|Drosophila melanogaster G-protein
           coupled receptor protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 584 RLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHSAXPSARSGTSAS 748
           RLL  C  Q  H  H RH   QR H   G  G + +  ++  +   +A +GT+++
Sbjct: 332 RLLLTCLGQRPHHHH-RHHYHQRQHPTAGGSGRNASTRQEQDAEEGAALAGTTSA 385


>AE014297-2963|AAS65191.1|  461|Drosophila melanogaster CG5911-PB,
           isoform B protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 584 RLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHSAXPSARSGTSAS 748
           RLL  C  Q  H  H RH   QR H   G  G + +  ++  +   +A +GT+++
Sbjct: 332 RLLLTCLGQRPHHHH-RHHYHQRQHPTAGGSGRNASTRQEQDAEEGAALAGTTSA 385


>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
            protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 416  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 258
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
            isoform F protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 416  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 258
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
            isoform E protein.
          Length = 2077

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 416  GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 258
            G  ++RY   + I +S R  +LD+  +V + LR DTV+    +NIID   Q I L
Sbjct: 888  GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,911,741
Number of Sequences: 53049
Number of extensions: 897114
Number of successful extensions: 2953
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2950
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)