Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0316
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 28 0.11
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.76
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.8
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 3.1
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.3
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 5.3
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 7.1
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 7.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.3
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 27.9 bits (59), Expect = 0.11
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -2
Query: 335 SLLRGDTVDCESALNIID*TKQFISLLN*DNIHKSSRIS 219
SLL+ +TV C+ A++++ + +++ DNIH IS
Sbjct: 381 SLLKENTVTCQEAMHMLKNADSQLLVISDDNIHIKGVIS 419
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.76
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 574 RDIPAPSTLCTSRTPRDTPSP 636
RD+P ST T+ RDT +P
Sbjct: 137 RDLPGKSTTTTAEVKRDTINP 157
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 574 RDIPAPSTLCTSRTPRDTPSP 636
RD+P ST T RDT +P
Sbjct: 137 RDLPGKSTTTTVEVKRDTINP 157
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 377 RSGRHTLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 258
R G+ + T L+ ++L + CE +NI K ++SL
Sbjct: 75 RYGQSAVGLTFLLGAILVQVAIICEGVMNIQKDNKSYLSL 114
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 608 DVHNVEGAGMSLAGHD 561
DVH V GAG + HD
Sbjct: 110 DVHGVIGAGHWIGDHD 125
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 129 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 230
R K+ LTG L K RL+ + P +P+
Sbjct: 182 RTKHRLTGETRLSATKGRLVITEPVGSVRPKFPS 215
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/45 (24%), Positives = 15/45 (33%)
Frame = +2
Query: 605 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHSAXPSARSGT 739
H G G + H H+R G + + R SGT
Sbjct: 1755 HSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGT 1799
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 139 YFRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLS 38
Y R +R T +H ++ +DG+G Y S S
Sbjct: 83 YNRMDMRNATYYQHQQDHGSGMDGMGGYRSASPS 116
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 585 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 698
G F VH+ T F T + + + + YI L R
Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 585 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 698
G F VH+ T F T + + + + YI L R
Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 429 LGSGWCGHHALPSTEHS*VRSPH 361
+G G HA P HS +PH
Sbjct: 419 MGHGHSHIHATPHHHHSHAATPH 441
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 17 RSQTWXVGQTWRCVCTETVNRSPQVARVLAPGDFPE 124
+S+T+ V ++WR + E NR+ R++ + E
Sbjct: 261 QSETYDVLRSWRNLMDEHSNRTNSDPRMILTEAYTE 296
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,176
Number of Sequences: 438
Number of extensions: 5349
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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