Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0314
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06540.1 68416.m00758 GDP dissociation inhibitor family prote... 67 1e-11
At3g59920.1 68416.m06687 Rab GDP dissociation inhibitor (GDI2) i... 49 3e-06
At2g44100.1 68415.m05484 Rab GDP dissociation inhibitor (GDI1) i... 48 6e-06
At1g62580.1 68414.m07060 flavin-containing monooxygenase family ... 32 0.42
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 31 0.56
At1g62540.1 68414.m07056 flavin-containing monooxygenase family ... 31 0.97
At1g19250.1 68414.m02395 flavin-containing monooxygenase family ... 31 0.97
At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containi... 30 1.7
At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like fami... 29 2.2
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 29 2.2
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 29 2.2
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 29 2.2
At1g63340.1 68414.m07160 flavin-containing monooxygenase-related... 29 2.2
At1g12200.1 68414.m01412 flavin-containing monooxygenase family ... 29 2.2
At5g55900.1 68418.m06970 sucrase-related similar to sucrase [Sol... 29 3.0
At2g29720.1 68415.m03612 monooxygenase family protein nearly ide... 29 3.0
At1g62570.1 68414.m07059 flavin-containing monooxygenase family ... 29 3.9
At5g58540.1 68418.m07330 protein kinase family protein contains ... 28 5.2
At3g46260.1 68416.m05007 protein kinase-related contains low sim... 28 5.2
At1g51260.1 68414.m05765 acyl-CoA:1-acylglycerol-3-phosphate acy... 28 5.2
At1g12160.1 68414.m01408 flavin-containing monooxygenase family ... 28 5.2
At1g65860.1 68414.m07473 flavin-containing monooxygenase family ... 28 6.8
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 27 9.0
At2g46180.1 68415.m05742 intracellular protein transport protein... 27 9.0
At2g35660.1 68415.m04373 monooxygenase family protein nearly ide... 27 9.0
>At3g06540.1 68416.m00758 GDP dissociation inhibitor family protein
/ Rab GTPase activator family protein similar to
SP|P26374 Rab proteins geranylgeranyltransferase
component A 2 (Rab escort protein 2) {Homo sapiens};
contains Pfam profile PF00996: GDP dissociation
inhibitor
Length = 563
Score = 66.9 bits (156), Expect = 1e-11
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Frame = +1
Query: 76 PTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSD 255
P+++ +IVVGTG+ ES++AAA S G +VLH+D + YG +AS + L F+ +
Sbjct: 12 PSNYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSVS 71
Query: 256 PDRQKQVYNLSEKWFIEKESAQGETTDENKGEPRKVWS-QADFAAEY-RKFNIDTT-PKL 426
P L + + + + ++ S +++ E+ R+FN+D P++
Sbjct: 72 PPPSPSSPPLPPS--NNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFNVDLAGPRV 129
Query: 427 LFSRGPLVELLISSNIARYAEFRCVTRVLTW-LNDQLMPVPCSRADVF 567
+F + L++ S Y EF+ + + +L VP SRA +F
Sbjct: 130 VFCADESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIF 177
>At3g59920.1 68416.m06687 Rab GDP dissociation inhibitor (GDI2)
identical to Rab GDP dissociation inhibitor AtGDI2
[Arabidopsis thaliana] GI:2446981
Length = 444
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +1
Query: 82 DFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPD 261
+++VIV+GTG+ E I++ S G VLHMD +D+YGG S N L K + P+
Sbjct: 4 EYEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLNLNQLWKKFRGEEKAPE 63
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 322 GETTDENKGEPRKVWSQADFAAEY----RKFNIDTTPKLLFSRGPLVELLISSNIARYAE 489
GE+T N + K + + A E+ R +N+D PK + G LV LI +++ +Y
Sbjct: 41 GESTSLNLNQLWKKFRGEEKAPEHLGASRDYNVDMMPKFMMGNGKLVRTLIHTDVTKYLS 100
Query: 490 FRCVTRVLTWLNDQLMPVPCS 552
F+ V ++ ++ VP +
Sbjct: 101 FKAVDGSYVFVKGKVQKVPAT 121
>At2g44100.1 68415.m05484 Rab GDP dissociation inhibitor (GDI1)
identical to GDP dissociation inhibitor [Arabidopsis
thaliana] GI:1655424
Length = 445
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +1
Query: 82 DFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEGLQK 231
+++VIV+GTG+ E I++ S G VLHMD +D+YGG S N L K
Sbjct: 4 EYEVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLNQLWK 53
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 394 RKFNIDTTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCS 552
R +N+D PK + + G LV +LI +++ +Y F+ V ++ ++ VP +
Sbjct: 69 RDYNVDMMPKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVFVQGKVQKVPAT 121
>At1g62580.1 68414.m07060 flavin-containing monooxygenase family
protein / FMO family protein low similarity to SP|P97501
Dimethylaniline monooxygenase [N-oxide forming] 3 (EC
1.14.13.8) (Hepatic flavin-containing monooxygenase 3)
(FMO 3) {Mus musculus}; contains Pfam profile PF00743
Flavin-binding monooxygenase-like domain
Length = 497
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 79 TDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWA 204
T V V+G G + A R G +V+ + +H GG+WA
Sbjct: 10 TSNHVAVIGAGAAGLVAARELRREGHSVVVFERGNHIGGVWA 51
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 91 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEG 222
V+V+G+G+ A +R ++V+ ++S DH GG S+ +G
Sbjct: 55 VVVIGSGIGGLCCGALLARYDQDVIVLESHDHPGGAAHSFEIKG 98
>At1g62540.1 68414.m07056 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase GB:AAA21178 GI:349534
from Oryctolagus cuniculus [SP|P32417], SP|P97501 from
Mus musculus; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 457
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 91 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLW 201
V+V+G G + A SR G V+ ++ GGLW
Sbjct: 13 VVVIGAGAAGLVAARELSREGHTVVVLEREKEVGGLW 49
>At1g19250.1 68414.m02395 flavin-containing monooxygenase family
protein / FMO family protein low similarity to SP|P97501
Dimethylaniline monooxygenase [N-oxide forming] 3 (EC
1.14.13.8) (Hepatic flavin-containing monooxygenase 3)
(FMO 3) {Mus musculus}; contains Pfam profile PF00743:
Flavin-binding monooxygenase-like
Length = 515
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 79 TDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFE 219
T +V ++G G+ S +AAA + + N ++SD GG+W S +E
Sbjct: 9 TSSRVAIIGAGV--SGLAAAKNLVHHNPTVFEASDSVGGVWRSCTYE 53
>At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 61 MDEDFPTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDH 186
+D D +F V +V TG + +I S++ KN+ D SDH
Sbjct: 341 VDPDSAVEFLVYMVSTGKLPAI--RTLSKLSKNLCRHDKSDH 380
>At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 771
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 596 KRMLMKMLTSIVGYSEEEMNNEFKDW 673
KRML + +I Y E ++N EF DW
Sbjct: 187 KRMLENRIPAIRSYVERKVNKEFGDW 212
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 154 KNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWF 300
+N+L + S+++YGG W+ L K + N + +Q+QV N K F
Sbjct: 281 QNLLRLTSNNNYGGDWSF-----LDKLLTTGNMNQQQQQQVQNHQAKCF 324
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 154 KNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWF 300
+N+L + S+++YGG W+ L K + N + +Q+QV N K F
Sbjct: 281 QNLLRLTSNNNYGGDWSF-----LDKLLTTGNMNQQQQQQVQNHQAKCF 324
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 154 KNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWF 300
+N+L + S+++YGG W+ L K + N + +Q+QV N K F
Sbjct: 281 QNLLRLTSNNNYGGDWSF-----LDKLLTTGNMNQQQQQQVQNHQAKCF 324
>At1g63340.1 68414.m07160 flavin-containing monooxygenase-related /
FMO-related low similarity to flavin-containing
monooxygenase 2 (FMO2) from Homo sapiens [SP|Q99518]
Length = 398
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 79 TDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWA 204
T V V+G G + A R G +V+ + + GG+WA
Sbjct: 10 TSHHVAVIGAGAAGLVAARELRREGHSVVVFERGNQIGGVWA 51
>At1g12200.1 68414.m01412 flavin-containing monooxygenase family
protein / FMO family protein low similarity to FMO2 from
Homo sapiens [SP|Q99518]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 465
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 70 DFPTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWA 204
D T V V+G G + A R G +V+ ++ GG+WA
Sbjct: 7 DPTTSRHVAVIGAGAAGLVAARELRREGHSVVVLERGSQIGGVWA 51
>At5g55900.1 68418.m06970 sucrase-related similar to sucrase
[Solanum tuberosum] GI:1200257
Length = 413
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = -3
Query: 584 RPLPVANTSAREQGTGIS*SLSQVRTRVTHRNSA*RAMFEEIRSSTRGPRENNSFGVVSM 405
R +P N S +Q S L ++ T +N++ R + S G EN S G
Sbjct: 317 RAVPELNGSGCQQNGNSSYCLEEIHTE---KNTSERVTSVKNASLRIGSSENGSSG---- 369
Query: 404 LNFRYSAAKSAWLHTFLGSPLFSSVVSPCA 315
F+ A S WL T+ ++++ CA
Sbjct: 370 -GFKVCAVMSMWLETWEREDTYAALAVACA 398
>At2g29720.1 68415.m03612 monooxygenase family protein nearly
identical to CTF2B [GI:4164578][Plant Physiol. 119, 364
(1999), PGR99-008]
Length = 427
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 28 LKPVCLI*TRMMDEDFPTDFQVIVVGTGMVESIVAAACSRIG--KNVLHMDSSDHYGGLW 201
LK VCL TR + +V++VG G+ A A R+G VL S GG
Sbjct: 24 LKSVCLTTTRAETSGVDREEKVVIVGGGIGGLATAVALHRLGIRSVVLEQAESLRTGGAS 83
Query: 202 ASYNFEGLQKFIKEVNSDPDRQKQ 273
+ + G + + ++ P +KQ
Sbjct: 84 LTLSKNG-WRVLDAISIGPQLRKQ 106
>At1g62570.1 68414.m07059 flavin-containing monooxygenase family
protein / FMO family protein low similarity to
flavin-containing monooxygenase FMO3 [Rattus norvegicus]
GI:12006730; contains Pfam profile PF00743:
Flavin-binding monooxygenase-like
Length = 461
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 91 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLW 201
V V+G G + A R G V+ +D GGLW
Sbjct: 13 VAVIGAGAAGLVAARELRREGHTVVVLDREKQVGGLW 49
>At5g58540.1 68418.m07330 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 484
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 545 LAPEPTYSPPEAVGIVEKRMLMKMLTSIVG 634
LAP P+ SPP + G +K + M+ IVG
Sbjct: 121 LAPAPSPSPPVSPGTTKKSPKVYMIVGIVG 150
>At3g46260.1 68416.m05007 protein kinase-related contains low
similarity to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = -2
Query: 549 ARNRHQLIVEPGQDAGHASELSVARDVRRDQKLDKGSAREQQLWSCINVKFPILRCKISL 370
A + QL+ + D+G + +S D GS Q S N KF + CK +
Sbjct: 326 ASSESQLVFKSTDDSGLPTIISGLEVYSISNYKDHGSGGGGQSGSSNNGKFLLNLCKCFI 385
Query: 369 APYFSW 352
+FSW
Sbjct: 386 NNFFSW 391
>At1g51260.1 68414.m05765 acyl-CoA:1-acylglycerol-3-phosphate
acyltransferase, putative similar to
acyl-CoA:1-acylglycerol-3-phosphate acyltransferase
GI:4583544 from [Brassica napus]
Length = 376
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 164 RTFLPILLQAAATMDSTMPVPTTMTWKSVGKSSSIILVYIRH 39
R+F+P + T+ + P PT + S G+SS I L RH
Sbjct: 215 RSFVPAIYDCTLTVHNNQPTPTLLRMFS-GQSSEINLQMRRH 255
>At1g12160.1 68414.m01408 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase FMO2 from Homo sapiens
[SP|Q99518]; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 468
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 91 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLW 201
V V+G G + R G V+ + H GGLW
Sbjct: 12 VAVIGLGAAGLVAVRELRREGHTVIGFEREKHVGGLW 48
>At1g65860.1 68414.m07473 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase FMO3 (dimethylaniline
monoxygenase (N-oxide forming) 3) GI:349533 [SP|P32417]
from Oryctolagus cuniculus, [SP|P97501] from Mus
musculus; contains Pfam profile PF00743 Flavin-binding
monooxygenase-like domain
Length = 459
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 91 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLW 201
V V+G G + A R G V+ D GGLW
Sbjct: 13 VAVIGAGAAGLVTARELRREGHTVVVFDREKQVGGLW 49
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 425 SFGVVSMLNFRYSAAKSAWLHTFLGSPLFSSVVSPCADSFSINHFSDKLYTCFCLS 258
S GV ++ ++ +K A H F S LFS + S C+D++ + H ++ + +C S
Sbjct: 132 SKGVQYVIYWKNVFSKYAACH-FRHS-LFSVIQSSCSDTWDVFHVAEASFRLYCTS 185
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +1
Query: 211 NFEGLQKFIKEVNSDPDRQKQVYNLSEKWFIEKESAQGETTDEN 342
+ + L+K ++E + D+ +Q ++ +EKE+ + E DE+
Sbjct: 352 SLQRLEKELEEARREKDKARQELKRLKQHLLEKETEESEKMDED 395
>At2g35660.1 68415.m04373 monooxygenase family protein nearly
identical to CTF2A [GI:4164576][Plant Physiol. 119, 364
(1999), PGR99-008]
Length = 439
Score = 27.5 bits (58), Expect = 9.0
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +1
Query: 31 KPVCLI*TRMMDEDFPTDFQVIVVGTGMVESIVAAACSRIG--KNVLHMDSSDHYGGLWA 204
KPVCL T + +V++VG G+ A + R+G VL S GG
Sbjct: 27 KPVCLALTNAQTNGGDQEEKVVIVGAGIGGLATAVSLHRLGIRSVVLEQAESLRTGGTSL 86
Query: 205 SYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWFIEKESAQ 321
+ F+ + + ++ P + Q + E ++KE +
Sbjct: 87 TL-FKNGWRVLDAISVGPQLRTQFLEI-EGMVVKKEDGR 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,074,791
Number of Sequences: 28952
Number of extensions: 325621
Number of successful extensions: 1191
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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