Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0313
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 40 0.003
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 36 0.027
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 33 0.25
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 33 0.33
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 31 0.76
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 31 0.76
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 31 1.3
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 30 1.7
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 30 2.3
SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069) 30 2.3
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 30 2.3
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 30 2.3
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 30 2.3
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 30 2.3
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 29 3.0
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 3.0
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 29 3.0
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_58454| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-21) 29 4.0
SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 29 4.0
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 29 5.3
SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) 29 5.3
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 5.3
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 29 5.3
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 29 5.3
SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9) 28 7.0
SB_16403| Best HMM Match : Candida_ALS (HMM E-Value=1.7) 28 9.3
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 28 9.3
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +1
Query: 334 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP-SATDAEGSADSAAIIPNMVKKI 510
A + A++ +EE Q ED++ V+ A + K E P T+A D A K +
Sbjct: 1172 ASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEAP-AEKTEKPV 1230
Query: 511 DLAPTVESDAAAIPEIKTP--EAADAPKLADNPVDEDKPAD 627
+ P+V+ A + E + P EA + A++P ++ P +
Sbjct: 1231 EAGPSVQEAEAPVKETERPVEEAEVQAEEAESPAEKGAPVE 1271
Score = 35.9 bits (79), Expect = 0.035
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +1
Query: 316 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 495
++E+P +A ++ + E PAA+PE + E +A V + + EE P A + E + D
Sbjct: 587 TAEVPIEDADTSTEEAESPAAEPEVAVKEAEAPVEDDAFEE-PEALN-EKAEDPKDEDET 644
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAA---DAPKLA-DNPVDEDK 618
+K ++ P E++A A E+ E A +A L + V+EDK
Sbjct: 645 QEEKAEV-PIDEAEAEAQAEVAGEEKALEEEAETLVEETKVEEDK 688
Score = 29.5 bits (63), Expect = 3.0
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +1
Query: 337 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 516
+ K D EE A P D + E +A AE++ EEK +AE + + + +
Sbjct: 637 DPKDEDETQEEKAEVPID-EAEAEAQ-AEVAGEEKALEEEAETLVEETKVEEDKAPIQEA 694
Query: 517 APTVESDAAAIPEIKTP-----EAADAPKLADNPVDE-DKPA 624
+V+ A + EI+ P E K D PV E + PA
Sbjct: 695 EASVKKAEATVEEIEAPIERAKEVEAQSKEVDAPVKEAEAPA 736
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/97 (30%), Positives = 43/97 (44%)
Frame = +1
Query: 322 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 501
E P EA+S D KVE P + E + EV+ATV E+ + +A E A +P +
Sbjct: 22 ETPIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVE-----EAEVP--I 74
Query: 502 KKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDE 612
+K + P E EA A + + PV E
Sbjct: 75 EKAETQPVDTEGPVENAETSFEEAEAADEETEEPVKE 111
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 492
+ +++ E ++ D+ +EP + E +A+ E K T+ A+ P
Sbjct: 165 EENDMGGTEEENPDVPSDEPLTGGTEEDDEKEASEEEEGKPSLEDGTEDTPEANKTPEEP 224
Query: 493 NMVKKIDLAPTVESDAAAIP----EIKTPEAADAPKLADNPVDEDKPAD 627
+K+ T + + + E++ P+ ++PK D P +ED P +
Sbjct: 225 KEDEKVTEEETPKEETPKVEDAPEEVEAPKEEESPKEEDTPKEEDAPKE 273
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 36.3 bits (80), Expect = 0.027
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +1
Query: 316 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 495
++E A+A SAD +V+E A + S T+ E +E + A G+A+ A
Sbjct: 55 AAEAAPAKAPSADAEVQEEAGEETASATQADEATTEAQPQEGAAENPATGAAEDA----- 109
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK-LADNPVDEDKP 621
K + PT E E P+A D P+ A P +E P
Sbjct: 110 ---KGEEEPTGEGTVLPPQEGDQPQATDIPEDHAPIPENEGVP 149
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 36.3 bits (80), Expect = 0.027
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +1
Query: 364 EEPA--AQPEDSKTEVQATVAEISKEEK--PSATDAEGSADSAAIIPNMVKKIDLAPTVE 531
E+P+ +P + K +++A E + + K P A G D+ P K D A E
Sbjct: 85 EKPSLDTKPAEDKPKIEAAKQEATADNKAEPKKEQASGIKDAPEATPK--KGADKATPKE 142
Query: 532 SDAAAIPEIKTPEA--ADAPKLADNPVDEDKPAD 627
+A+ EA +A K NP EDKPA+
Sbjct: 143 VEASGDEVASEAEAKPVEAAKTESNPAKEDKPAE 176
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 34.7 bits (76), Expect = 0.081
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +1
Query: 340 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 519
AKS D+K E A++ ++ T+ ++ K+ KP++ + A +A + N K +++
Sbjct: 1912 AKSKDVKNAEEASRNDEDDTKTGNVSEDLIKQAKPTSKTRKKRASLSAKVTNFEKTVNVD 1971
Query: 520 PTVESDAAAIPEI 558
+S +P +
Sbjct: 1972 VESQSSERELPRV 1984
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 361 VEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPT 525
+E PA ED KT+ +AT AE+ +E KP+A D + SA S ++ I+++PT
Sbjct: 1129 LESPA---EDVKTDFEATSLEAEVFEEYKPTAKDVKESASSTV---HLAADIEISPT 1179
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 32.7 bits (71), Expect = 0.33
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 11/143 (7%)
Frame = +1
Query: 211 IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKS-ADIKVEEPAAQ-P 384
+P D + P SD+ + ++ KS +D +V P++ P
Sbjct: 591 VPTTSDDQVTPSASDVPTTSDDQVTPSASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVP 650
Query: 385 EDSKTEVQATVAEISKEEK----PSATDAEGSAD-----SAAIIPNMVKKIDLAPTVESD 537
S +V + +++ PSA+D ++D SA+ +P + P+
Sbjct: 651 TTSDDQVTPSASDVPTTSDDHVTPSASDVPTTSDDQVTPSASDVP-AASDNQVTPSASDV 709
Query: 538 AAAIPEIKTPEAADAPKLADNPV 606
+A + TP A D P +DN V
Sbjct: 710 PSASDDQVTPSAIDVPTTSDNQV 732
Score = 29.5 bits (63), Expect = 3.0
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 10/151 (6%)
Frame = +1
Query: 190 SNDEV--PA--IPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADI 357
S+D+V PA +P A + + P SD+ +S++P
Sbjct: 818 SDDQVTPPASDVPTASDNQVTPSASDVPTTSDDHVTP--------SASDVPTTSDDQVTP 869
Query: 358 KVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSAD-----SAAIIPNMVKKIDLA 519
+ +D T + V S ++ PSA+D ++D SA+ +P +
Sbjct: 870 SASDVTPTSDDQVTPSSSDVTPTSDDQVTPSASDVPTASDDQVTQSASNVPTASDN-QVT 928
Query: 520 PTVESDAAAIPEIKTPEAADAPKLADNPVDE 612
P+ A + TP A+D P +D+ V +
Sbjct: 929 PSASDVLTAKDDHVTPSASDVPTTSDDQVTQ 959
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Frame = +1
Query: 316 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEE-KPSATDAEGSADSAAIIP 492
+S++P A + +D T + V S ++ P A+D ++D P
Sbjct: 736 ASDVPTASDDQVTPSASDVPTTSDDQVTPSASDVMSTSDDQVTPPASDVMSTSDDQVTPP 795
Query: 493 NM----VKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 606
+ P+ A + TP A+D P +DN V
Sbjct: 796 ASDVPTTSDDQITPSSSDVPATSDDQVTPPASDVPTASDNQV 837
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 331 DAEAKSADIKVEEPAAQPEDSKT----EVQATVAEISKEEKPSATDAEGSADSAAIIP 492
DAE S+ I V P+AQ E +T V + +A ++ E D+ D AIIP
Sbjct: 285 DAEPASSSISVSVPSAQAEQGRTTEGRPVSSDIATVAMEVPEVQGDSLADVDIDAIIP 342
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 31.5 bits (68), Expect = 0.76
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +1
Query: 334 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 513
+E KS D ++P +PED + E E+KP + D P K++
Sbjct: 25 SEDKSGDKPQDKPENKPEDQPEDKPGDKPEDKTEDKPEDKPEDKPEDKPEDKPE--DKLE 82
Query: 514 LAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPAD 627
P E + PE PE D P+ EDKP D
Sbjct: 83 DKP--EDSSEEKPE-DNPE--DKPEYKPEDKPEDKPED 115
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 4/146 (2%)
Frame = +1
Query: 196 DEVPAIPEAKKDDIAP-EDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEP 372
D +P P+ + ++P ++ ++ A + P+A +A + E
Sbjct: 328 DSIPTAPKVFPEKLSPSKEREVTKQPEAPGATAQPEAPDATAQ--PEAPDATAQPEATET 385
Query: 373 AAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI 549
AQPE K T + ++ E P AT A+ A A +P + E+ A
Sbjct: 386 TAQPEAPKATALPEAPKATAQPEAPEAT-AQPEAPKATALPEAPEATAQPEATETTAQPK 444
Query: 550 PEIKT--PEAADAPKLADNPVDEDKP 621
+ T PEA +A + P ED P
Sbjct: 445 AQKATAQPEAPEATAQPEAP--EDNP 468
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAA-QPEDSKT-EV---QATVAEISKEEKPSATDAEGSADS 477
K + D + S+D +E A +P S T EV T A + EE+PS TD EGS +
Sbjct: 359 KQTTAHDPTSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQT 418
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +1
Query: 331 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 510
+A +A P A P T A A ++ P+A +A +A + P
Sbjct: 35 EASLTAASAAPVTPTAAPAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAAPAA 94
Query: 511 DLAPTVE--SDAAAIPEIKTPEAADAP 585
+ PT + AA TP AA AP
Sbjct: 95 RVTPTAARVTPTAAPAAPVTPTAAPAP 121
>SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)
Length = 932
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Frame = +1
Query: 343 KSADIKVEEPAAQPED--SKTEVQATVAEISKEEKPSATDAEGS--ADSAAIIPNMVKKI 510
+S D + PA E QAT S P +TDA+ S A S A IP+
Sbjct: 626 RSTDAQASRPATSNATVPRSAETQATRPTTSNATIPRSTDAQASRQATSTATIPSAADAQ 685
Query: 511 DLAPTVESDAAAIPEIKTPEAADAPKLA 594
PT + A I K P A
Sbjct: 686 ASKPTTPTSATPIATDKQASKQVTPTAA 713
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +1
Query: 331 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 510
+A +A P A P T A A ++ P+A +A +A + P
Sbjct: 192 EASLTAASAAPVTPTAAPAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAAPAA 251
Query: 511 DLAPTVE--SDAAAIPEIKTPEAADAP 585
+ PT + AA TP AA AP
Sbjct: 252 RVTPTAARVTPTAAPAAPVTPTAAPAP 278
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 328 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 483
PD +A + + + + P +Q EDS + T +S EE+P ++ S SAA
Sbjct: 915 PDPQAPATNNQTDNPPSQYEDSSS--SETNGVLSDEEQPPLPLSDSSIQSAA 964
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 319 SEIPDAE-AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 471
S++P + AK+A+ + E+ A PE+ E A E K ++ D EG+A
Sbjct: 50 SKMPSKKGAKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKDASKDGEGNA 101
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +1
Query: 364 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAA 543
++P +PED + E E+KP A + D +P K + P + +
Sbjct: 150 DKPEDKPEDKPEDKLEGKPENKPEKKPKAKSEDKPEDMPEDMPE--DKPEYRPEYKPEDK 207
Query: 544 AIPEIKTPEAADAPKLADNPVD--EDKPAD 627
PE K PE K D P D +DKP D
Sbjct: 208 --PE-KKPEKKPEDKSEDKPEDKHKDKPED 234
Score = 27.9 bits (59), Expect = 9.3
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 2/97 (2%)
Frame = +1
Query: 337 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 516
+AKS D + P PED E E+KP + S D + L
Sbjct: 177 KAKSEDKPEDMPEDMPEDKPEYRPEYKPEDKPEKKPEKKPEDKSEDKPEDKHKDKPEDKL 236
Query: 517 APTVESDAAAIPEIKTPEAADAPKLADNPVD--EDKP 621
E PE PE K D P D EDKP
Sbjct: 237 EDKPEDKKEEKPE-DNPEEKPEDKQEDKPEDKQEDKP 272
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +1
Query: 316 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 495
SS P + KS+ EE ++P S + A + +EEK A+ S D P
Sbjct: 439 SSPAPQEDDKSSSA-TEEYKSEP--SSAQPSANQSPEPEEEKEEASPVP-SKDEEETSP- 493
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAPKL-ADNPVDEDKP 621
M K + P PE + EAA+ + A +PV+ED P
Sbjct: 494 MPAKGEGTPEKREIEEESPEEEKGEAAEKAAVHAQSPVEEDAP 536
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Frame = +1
Query: 364 EEPAAQPE-----DSKTEVQATVAEISKEEKPSATDAEGSADSAAI----IPNMVKKIDL 516
EEP PE D K E SK ++ + A + +P VK++
Sbjct: 288 EEPNTDPEEKEGPDEKENADEVFQERSKLDRSPPLRKKHEPFVAPLDDTPVPEPVKEVPA 347
Query: 517 APTVESDA-AAIPEIKTPEAADAPKLADNPVDEDKPADI 630
P + + +K P A AP P D DKPA +
Sbjct: 348 RPVTKQEPFKQTKPVKEPSLAPAPTANMVPSDRDKPAGL 386
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAA-QPEDSK-TEVQATVAEISKEEKPSA-TDAEGSADSAA 483
K + D E K + + E+ + E +K TEVQ V E +KEE PS DAE A
Sbjct: 1025 KKRKDSDKERKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAG 1084
Query: 484 IIPNMVKKIDLAPT 525
+ ++ P+
Sbjct: 1085 SVSALLSVFATEPS 1098
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 443 GFSSFEISATVACTSVFESSG*AAGSSTLISADFASASGISDDF 312
G SS ++ +C+SVFE + A SS L AD + + IS ++
Sbjct: 498 GGSSSQMDVMGSCSSVFEQAMLAGESSNLSDADKSESKDISKNY 541
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/86 (30%), Positives = 34/86 (39%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 492
+ S + +AEA EE A+PE T E S E KP A+ E +A A P
Sbjct: 492 RKSPVSEAEAPKPSAAKEE--AEPEQMDTSEPEPAKEPSSEIKPEASKPE-TAKPEATSP 548
Query: 493 NMVKKIDLAPTVESDAAAIPEIKTPE 570
+ P ES A E + E
Sbjct: 549 TDGEPAKPEPAEESSAKPSEEAEIME 574
>SB_58454| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-21)
Length = 322
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 735 WFWSSLVSGATGMSSLAVVA--ESSADLASAFGASGEN 628
W W+ +V A +++LAV++ SS DL G + N
Sbjct: 64 WIWADMVCAAASIANLAVISVDSSSVDLLRDLGVAVNN 101
>SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2)
Length = 623
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 337 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 516
+ + D K++ E + ++ + + E S ++E S +++A K
Sbjct: 98 QTRIQDAKMDSEIVSKESERKKLSPEIGD-GIREVASEENSEKSIETSAASETATKSPST 156
Query: 517 APT--VESDAAAIPEIKTPEAADAPKLADNPVDEDKPADI 630
T +SD + EI + + D+ K++ NP D +P D+
Sbjct: 157 ENTGSTKSDKDDVVEISSDD--DSDKISANPTDVQEPMDL 194
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +1
Query: 370 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI 549
P ++PE + E + + S + T S A P KI ES ++I
Sbjct: 1557 PESRPEKASEEDEDMPSPHSVDLTRDGTPPT-SPSPEATNPLSDPKITTFKVPESPTSSI 1615
Query: 550 PEIKTPEAADAPKLADNPVD 609
P +AD+P +A +P+D
Sbjct: 1616 EATTAPTSADSPTVATSPID 1635
>SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71)
Length = 1043
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/105 (21%), Positives = 41/105 (39%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 492
K S+ E + + + + K E + + ++ KEE + S +S +I
Sbjct: 840 KMSDKKKKEESDEEFRDDTSKQSDKKKKMEFEGSFSDDKKEESDNIKKGSESKESFVVIK 899
Query: 493 NMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPAD 627
+ I ++ DA KT + KL VD D+P+D
Sbjct: 900 DEKGNILYKGMMDIDALK----KTESDGKSEKLKIKKVDSDEPSD 940
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Frame = +1
Query: 316 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP- 492
S + P E K D+K +D T ++ + +E KP + A A P
Sbjct: 255 SGDAPHHEEKKEDLKEVVIKQSKQDEATAIKDSKSESKPASKPKLKAVQNDAPKKANKPA 314
Query: 493 -NMVKKIDLAPTV--ESDAAAIPE-IKTPEAADAPKLADNPVDEDKPA 624
K + A V + +P P +A+A + NP + +PA
Sbjct: 315 KKAKKPVKRAKKVLNKKKMDTLPRGAHRPASANAQRRPQNPYAQQRPA 362
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 28.7 bits (61), Expect = 5.3
Identities = 28/98 (28%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Frame = +1
Query: 343 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 522
KS D +P +PED + Q E E+KP + D K
Sbjct: 418 KSKDKLEVKPEDRPEDKPEDKQQNKPEDKPEDKPEDKPEDKPEDKPEDKQQNKPKYKPED 477
Query: 523 TVESDAAAIPEIK---TPEAADAPKLADNPVDEDKPAD 627
E P+ K PE K DNP EDKP D
Sbjct: 478 KPEDKPEDKPKDKLEDRPEDKPEEKSKDNP--EDKPED 513
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +1
Query: 364 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAA 543
++P +PED+ + E E KP + S D P K + P E
Sbjct: 3 DKPEDKPEDTPEDKPEDKPEGKPEGKPEGKPKDKSGDKPEDKPE--NKPEDQP--EDKPG 58
Query: 544 AIPEIKTPEAADAPKLADNPVD--EDKPAD 627
PE KT + + K D P D EDKP D
Sbjct: 59 DKPEDKTEDKPE-DKPEDKPEDKPEDKPGD 87
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +1
Query: 319 SEIPDAEAKSADI-KVEEPAAQ-PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 492
+E P E K + KVE+P + PE K EV+ V+ KP G + P
Sbjct: 1013 NEKPVEEEKQPEKPKVEKPEVEEPEVEKPEVEEPVSG-----KPEVETPVGEVPQEVLAP 1067
Query: 493 NMVKKIDLAPTVESDAAAIPEIKTPEAADA 582
V+ ++ AP D P + P+ DA
Sbjct: 1068 VTVEVVETAPITLEDMK--PTGEAPKVVDA 1095
>SB_671| Best HMM Match : Pneumo_matrix (HMM E-Value=3.9)
Length = 907
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +1
Query: 355 IKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES 534
I ++ + E + ++ T++ + + ++ G A P++ K +DLA T +
Sbjct: 546 IAAQQRMSDREFQRRQLTGTLSSSTVTARVASMGLGGDMFLHAADPSIKKSLDLALTRFN 605
Query: 535 DAAAIPEIKTPEAADAPKLADNPVD 609
+ KTP P ADN +D
Sbjct: 606 VETSSKYFKTPSYVSIPTGADNSMD 630
>SB_16403| Best HMM Match : Candida_ALS (HMM E-Value=1.7)
Length = 2372
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 385 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK--KIDLAPTVESDAAAIPEI 558
ED+ + +A V E + KPS + + + D A P + + + P + +
Sbjct: 1418 EDANVQAKADVVEPVQAVKPSQANDKTADDDACEPPRSPRAFTLPITPVHLEPSPSTSRQ 1477
Query: 559 KTPEAADAPKLADNPVDE 612
+TP A + AD+ DE
Sbjct: 1478 RTPLLRQADRTADSDSDE 1495
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 448 ATDAEGSAD-SAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPA 624
A D SA+ +I P++ + +DL +E D +P+I T A P P D PA
Sbjct: 246 ADDLAYSAELGPSIAPSVPQGLDLPDVLEHDIPEVPDIVTGGGAPVP--PPPPADGSAPA 303
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 346 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII--PNMVKKI 510
SA + A++ D ++++ + A+ K+E+ SAT + ++S+ ++ P+ ++KI
Sbjct: 196 SATHRTLSAASRDLDKRSDISLSSAKPEKQEQESATVEQPESESSTMVLYPHQIQKI 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,058,232
Number of Sequences: 59808
Number of extensions: 252853
Number of successful extensions: 4535
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4499
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -