Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0313
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 37 0.018
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 37 0.018
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 37 0.018
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 37 0.018
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 36 0.031
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 36 0.041
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 35 0.071
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 34 0.12
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 34 0.12
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 32 0.38
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.38
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.66
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.66
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.66
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.66
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.5
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 2.0
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 2.7
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 29 2.7
AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical ... 29 2.7
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 29 3.5
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr... 28 6.2
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 6.2
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 28 6.2
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 6.2
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 6.2
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 6.2
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 6.2
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 8.1
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 36.7 bits (81), Expect = 0.018
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 310 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 489
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 490 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDED 615
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 153
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 385 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 564
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 565 PEAADAPKLADNP 603
PE D P + P
Sbjct: 79 PEVQDVPDSSGAP 91
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 36.7 bits (81), Expect = 0.018
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 310 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 489
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 490 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDED 615
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 385 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 564
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 565 PEAADAPKLADNP 603
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 36.7 bits (81), Expect = 0.018
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 310 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 489
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 490 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDED 615
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 385 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 564
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 565 PEAADAPKLADNP 603
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 36.7 bits (81), Expect = 0.018
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +1
Query: 310 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 489
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 490 PNMVKKIDLAPTVES----DAAAIPEIKTPEAADAPKLADNPVDED 615
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 385 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKT 564
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 565 PEAADAPKLADNP 603
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 477
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 478 AAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAP 585
+ K AP + ++ A E K E AP
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE-KVAETTVAP 218
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 35.5 bits (78), Expect = 0.041
Identities = 37/145 (25%), Positives = 52/145 (35%)
Frame = +1
Query: 190 SNDEVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEE 369
+++ PA EA D A ++ A A SS +P+ A E
Sbjct: 504 ASEPAPAPIEAPATDAATLETAPAPAAEPAPAAEAAAGYDAPSS-VPEETPAPAPAADET 562
Query: 370 PAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI 549
PA P +T A AE + P+A + +A +A P D P + A A
Sbjct: 563 PAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAPAADETP---APAPAA 619
Query: 550 PEIKTPEAADAPKLADNPVDEDKPA 624
E P A A P E+ PA
Sbjct: 620 EETPAPAPAVEETPAPAPAVEETPA 644
Score = 31.9 bits (69), Expect = 0.50
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = +1
Query: 328 PDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPN 495
P AE A + AA DS AT S E +A TD+ SAD+ A + +
Sbjct: 289 PTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVD 348
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAP-KLADNPVDEDKPADI 630
A + E+ A I +T A P +AD D P+ I
Sbjct: 349 TSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSSI 394
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/99 (26%), Positives = 35/99 (35%)
Frame = +1
Query: 328 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 507
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 508 IDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPA 624
+ P + AA P A +AP A P + PA
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP--APAPAAPETPA 732
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 310 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 483
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 484 IIPNMVKKIDLAPTVESDAAAIPEIKTPEAADA 582
P + D A + ++ A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 34.7 bits (76), Expect = 0.071
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = +1
Query: 334 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 513
AE K D K E P +P+ + E + +KP +T + + +AA K+
Sbjct: 341 AEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKSTTKKPTKTAAA----STKR-- 394
Query: 514 LAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDK 618
PT E A E+K+ AA P ++ P D+
Sbjct: 395 -PPTTEKPTATTEEVKSTTAAAKP--SERPTGHDE 426
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +1
Query: 334 AEAKSADIKVEEPAAQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMV 501
A A+SA VEE AA E ++ V+ AT A S E+P A +A+S P
Sbjct: 610 APAESAPASVEE-AAPSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEE 668
Query: 502 KKIDLAPT-VES--DAAAIPEIKTPEAADAP 585
K + +PT +ES D + + E+A AP
Sbjct: 669 HKDEASPTALESVEDVIEAVHVASTESAPAP 699
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 33.9 bits (74), Expect = 0.12
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Frame = +1
Query: 343 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 519
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 520 P---------TVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADIFT 636
P T S A P + PE K AD D FT
Sbjct: 125 PAAPVAPPQLTQASPAPVAPAVLVPE---KEKTADKSQSNDSSMTSFT 169
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/101 (24%), Positives = 44/101 (43%)
Frame = +1
Query: 316 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 495
S + P AKS D + ++ E+ + + + + SK K +A+D + + A +
Sbjct: 185 SKKSPKKSAKSKD----DDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKS 240
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDK 618
K P E D +KTP+ K A+ P +ED+
Sbjct: 241 KKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 358 KVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES 534
K+EE A + E+ K ++Q+ A D S D +IP VK I PT+
Sbjct: 435 KLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTIPL 494
Query: 535 DAAAIPEIKTPEA 573
+ + +++ P A
Sbjct: 495 ETQDV-DMREPSA 506
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 489
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 490 -PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDK 618
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 328 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 495
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 588
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 489
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 490 -PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDK 618
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 328 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 495
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 588
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 489
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 490 -PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDK 618
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 328 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 495
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 588
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 489
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 490 -PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDK 618
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 328 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEIS----KEEKPSATDAEGSADSAAIIPN 495
P + KS + E+PA+ + KT ++ E+ KE+ PS+ + +S P
Sbjct: 1791 PTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPE 1850
Query: 496 MVKKIDLAPTVESDAAAIPEIKTPEAADAPK 588
++ +PT + P+ K ++ +A K
Sbjct: 1851 KPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/106 (26%), Positives = 37/106 (34%)
Frame = +1
Query: 310 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 489
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 490 PNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPAD 627
P K D +P A+P P+ AP P KP D
Sbjct: 608 PEKSKPRDPSP-----KKAVPAKPVPKTEVAPAAVKKPEPISKPKD 648
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 436 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADN-PVDE 612
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 613 DKP 621
P
Sbjct: 340 TTP 342
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 361 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 507
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/85 (23%), Positives = 29/85 (34%)
Frame = +1
Query: 367 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAA 546
E +A PE + + S P S+A+ P APT + +
Sbjct: 197 ESSASPEMLRLAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPK 256
Query: 547 IPEIKTPEAADAPKLADNPVDEDKP 621
P + A +PK PV KP
Sbjct: 257 APVVAPTRRAPSPKAPVAPVAPVKP 281
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 310 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 471
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 502 KKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADI 630
KK D P+ +P TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical
protein F58H7.5 protein.
Length = 272
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +1
Query: 349 ADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTV 528
A+++VEE P+DS E + +AE K++ S + E + L V
Sbjct: 93 AEMEVEE-VDSPQDSPDEFEEDIAEEVKDKSASEEEEEDEHQVFQFENPRDLEDPLRRRV 151
Query: 529 ESDAAAIPEIKTPEAADAP-KLADNPVDEDKPADI 630
+ P + P DAP ++A NPVD++ DI
Sbjct: 152 PYE-IHFP-FREPPQEDAPMRMAQNPVDQEAIDDI 184
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 430 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPTVESDAAAIPEIKTPEAADAPKLADNPV 606
+ E+ S +EG++ +I P KKI D+AP + D + I + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 607 DEDKP 621
P
Sbjct: 247 TSQSP 251
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 379 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 522
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 379 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 522
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 337 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 516
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 517 APTVESDAAAIPEIKTP 567
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 337 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 516
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 517 APTVESDAAAIPEIKTP 567
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 337 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 516
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 517 APTVESDAAAIPEIKTP 567
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 337 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 516
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 517 APTVESDAAAIPEIKTP 567
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical protein
F11E6.7 protein.
Length = 1011
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +1
Query: 364 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA-AIIPNMVKK---IDLAPTVE 531
E+P + E++A V+ SK+ + + + ++ A +I + K I P+VE
Sbjct: 743 EKPMDVADAIPPEIEA-VSPSSKDSQSVPMETKDNSPPANEVIAQELPKASPISNTPSVE 801
Query: 532 SDAAAIPEIKTPEAADAPKLADNPVDEDKPADIFT 636
S A+ KTPEA+ +P +P+ + + FT
Sbjct: 802 STQPALNVQKTPEASQSPA---SPISSNTGSSTFT 833
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = +1
Query: 313 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 468
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 469 ADSAAIIPNMVKK 507
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Frame = +1
Query: 316 SSEIPDAEAKSADIKVE-EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 492
SSE + +S + + +PA + SKT T A K+ K S + + P
Sbjct: 205 SSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEP 264
Query: 493 NMVKKIDLAPTVE----SDAAAIPEIKTPEAADAPKLADNPVDEDK 618
+ + + T E S++ E T ++ + PK D +DK
Sbjct: 265 STEESSESPETSEEPQSSESTPTSEESTEQSTEKPKKEDKKDKKDK 310
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 43 VSLAMPVAEEKDVVPAQPIL 102
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 43 VSLAMPVAEEKDVVPAQPIL 102
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 499 VKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPVDEDKPADI 630
V +DL T E+ IPEI TP D+ + +N V+ + ++I
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEI 330
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 43 VSLAMPVAEEKDVVPAQPIL 102
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 43 VSLAMPVAEEKDVVPAQPIL 102
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 322 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 462
E + E + + K+EEPAA+ E+ + E + E EE+ + E
Sbjct: 347 EPEEEEEEEEEEKIEEPAAKEEEEEEEEEEEEEEEELEEEEEEEEEE 393
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 329 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 430
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,983,144
Number of Sequences: 27780
Number of extensions: 185364
Number of successful extensions: 888
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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