Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0309
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 30 0.31
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 30 0.40
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 29 0.94
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 28 1.2
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 28 1.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.2
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 28 1.2
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 27 2.2
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 27 2.2
SPAC7D4.06c |alg3||dolichol-P-Man dependent alpha|Schizosaccharo... 27 2.9
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 2.9
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 27 2.9
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.0
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 26 5.0
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 26 6.6
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 26 6.6
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 8.7
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 25 8.7
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 30.3 bits (65), Expect = 0.31
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 598 DDVSVSGFNSGKGTSGIKSILSEIGRGSSFITG 500
DD+ VSGFN G G+S ++ + + RG + G
Sbjct: 591 DDILVSGFNFGTGSSREQAATAILSRGIPLVVG 623
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = +3
Query: 180 KTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHV--VNPDADKTESKAEP 353
+TPS+ P TP + ++P TP P + P A T ++ P
Sbjct: 493 RTPSQRGRVAVPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAEPPSATSTANRRHP 552
Query: 354 EPEQLPVN 377
++ +N
Sbjct: 553 TANRIDIN 560
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 0.94
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +3
Query: 156 QNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKT 335
+NE EE++ EA ++T E P E + Q + A+ E D ++T
Sbjct: 41 ENEGYEELEKSGEAGAERTKENPFREEPGADFDRSGSDQQYSAEAEANQE----DDLNET 96
Query: 336 ESKAEPEPEQLPVNGLSLEQSKTETPE 416
+A P+P + G +L + + E
Sbjct: 97 SQQA-PDPSSYDIRGQALSSATWDNAE 122
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 28.3 bits (60), Expect = 1.2
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
Frame = +3
Query: 102 VNRXKVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEP--ITNGHSTPETPQV 275
V K P E T QS+ ET + + + E T V EP +G S E +V
Sbjct: 521 VTNLKSPNENDRVTKTQSRRETKVKRRRKARIQETSEESTVVNEPNEKPDGRSRRERKKV 580
Query: 276 ETLAADQPVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPEV 419
+ N D KA+ + + P N + +KTET +
Sbjct: 581 NYALPGLRTKLRRNFDLPSDHVKAK-KTRRAPKNSENDSATKTETANI 627
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 147 EQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDA 326
E N V+E K +++N K PE +TE + P + T + E VN D
Sbjct: 55 EDKGNAEVKEFKETTKSNGVK-PEVEITESTKIQKESNTEPCISTGGKVEEKELKVNKDV 113
Query: 327 DKTESKAEPE 356
D+ E E
Sbjct: 114 DENEGHVAVE 123
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = +3
Query: 123 EEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQ--VETLAADQ 296
+EV+E S T + TP + ++D PVTEP S P E++
Sbjct: 911 KEVVEKAP--SPPATRPKSTTPQKFDDDAWANKPVTEPPVRASSVTVEPARVTESMNKMN 968
Query: 297 PVEHVVNPDADKTESKAE-PEPEQ 365
E P+A A PEPE+
Sbjct: 969 ISEEAKKPEAPSRPRTAPIPEPEE 992
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Frame = +3
Query: 132 IEATAEQSQN-----ETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQ 296
+ AT EQ +N + K P + + T + EP ++ E P+ E A+Q
Sbjct: 281 LNATTEQPKNTAEVAQGAASAKAPQQTTQQGTQNSANAEPSSSASVPAEAPETE---AEQ 337
Query: 297 PVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPEVN 422
++ V+ D ++P + +Q + T + N
Sbjct: 338 SID--VSSDIGLRSDSSKPNEAPTSSENIKADQPENSTKQEN 377
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 201 EDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQLP 371
ED+ + P P ST TP+VET AA P P +T + A P++ P
Sbjct: 94 EDEVADEPAEAPA----STSSTPKVETAAAAAPAA-TPAPAPAQTSAPAAALPDEPP 145
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +3
Query: 243 NGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTE 407
N S P P+V + PV+ V P A + P L LS S T+
Sbjct: 539 NQPSRPRLPRVASPLKTSPVKLAVTPQAPSPLPSSNPSQASLTEESLSTRSSPTK 593
>SPAC7D4.06c |alg3||dolichol-P-Man dependent
alpha|Schizosaccharomyces pombe|chr 1|||Manual
Length = 406
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 218 FRSLILICFARSFHFFDSFILRLFSSCFNHLFGNL 114
F +L+ ++ H FILRLF+ FN LF +L
Sbjct: 131 FYIYVLLILSKRLHSI--FILRLFNDGFNSLFSSL 163
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 135 EATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVV 314
+A +++S+ + + SE N++ ++G S+PETP + + + +
Sbjct: 483 KAKSDKSRAKLSSDTNKDSEKNDNNDASLQSAGVASDGESSPETPLTKASKSKKAKASKL 542
Query: 315 NPDADKT---ESKAEPEPEQLPVNGLSLEQSKT 404
D K E+K+ P+ + + E + T
Sbjct: 543 ANDTSKNANGETKSTPKKSKKKTSKAQQEANST 575
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/98 (22%), Positives = 39/98 (39%)
Frame = +3
Query: 129 VIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEH 308
++EA +++S E++ E+ S+ + P T VT T +T V V
Sbjct: 155 LVEADSQESDTESLPEINDSSDVSLSDLPSTNVTPKKTTTQIDVQTNIVTPPITVTAVPD 214
Query: 309 VVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPEVN 422
NP A + A+ + + +S + T P N
Sbjct: 215 SPNPPAATPATVADNDDLSI----VSSDSGNTTAPRKN 248
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 613 ATATSDDVSVSGFNSGKGTSGIKSILSEIGR 521
+TA DDVS + +S KGT+G+ S+ R
Sbjct: 586 STAVRDDVSSASSDSDKGTTGLGKSESKSSR 616
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 5.0
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 120 PEEVIEATAEQSQNETVEEVKTPSEANE----DKTPETPV-TEPITNGHSTPETP-QVET 281
P+ E+T E++ + + SEA++ + PE P+ EP PE P E
Sbjct: 64 PKNTFESTQTYENLESISKNEPTSEASKPLLNELVPEEPLPREPPLPNEPVPEEPLPGEP 123
Query: 282 LAADQPVEHVVNPDADKTESKAEPEP---EQLPVNGLSL-EQSKTET 410
D+PV P ++ PE ++ P++ ++ E SK +T
Sbjct: 124 PLPDEPVPEEPLPGEPPLPNEPVPETNCHKESPLSDETVSETSKNDT 170
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 117 VPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQ 296
+P+E T+ TVE V T + N+D+ VTE ++ + E ++ ++
Sbjct: 436 LPDEPTAETSNPVSATTVEAVTT-TADNKDEEKNDHVTEDVSQNSTIAEASSLQAQEEEK 494
Query: 297 PVE 305
+E
Sbjct: 495 EIE 497
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 189 SEANEDKTPETPVTEPITNGHSTPETPQV 275
+E+++D TP TP P+ T +P++
Sbjct: 188 TESDQDSTPATPFPMPMHLAEETATSPEI 216
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 240 TNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPE 356
+NG TP + Q ++ D P H N E+ AEP+
Sbjct: 550 SNGSMTPSSSQNNSVIIDIPRSHFDNAGEVCLENLAEPD 588
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/73 (21%), Positives = 29/73 (39%)
Frame = +3
Query: 117 VPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQ 296
+P + E++ +EE T +T TP+ E +T V T+
Sbjct: 193 LPMAAMTTPMEETTTTPMEETTTTPMV---ETMITPMVEAMTTPTEVVGRSMVSTIRTTT 249
Query: 297 PVEHVVNPDADKT 335
P+E ++ P + T
Sbjct: 250 PMEAMITPTVETT 262
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 25.4 bits (53), Expect = 8.7
Identities = 20/96 (20%), Positives = 43/96 (44%)
Frame = +3
Query: 126 EVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
E ++A ++ ++ V++ K P + + K +P+ E VET + V+
Sbjct: 103 EEVKAKEKRIKSPDVKDFKLPKDILKVKEKSE---KPLETSQKV-EIETVETKPGEPEVK 158
Query: 306 HVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETP 413
N +K ESK + E ++ ++ S++ +P
Sbjct: 159 QETNLQKEKKESKVKLESKEEKISRNLRSSSRSISP 194
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,463,172
Number of Sequences: 5004
Number of extensions: 45142
Number of successful extensions: 287
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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