Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0309
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    26   0.43 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    26   0.43 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    26   0.43 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   1.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   1.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   1.3  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    23   3.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +3

Query: 147 EQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
           E+++   +  V++      D   E+  +E   N  STP +    +L  D+P E
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTE 281


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +3

Query: 147 EQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
           E+++   +  V++      D   E+  +E   N  STP +    +L  D+P E
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTE 281


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +3

Query: 147 EQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
           E+++   +  V++      D   E+  +E   N  STP +    +L  D+P E
Sbjct: 229 ERARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSLIDDEPTE 281


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 370 GNCSGSGSALDSVLSAS 320
           G C+G G  L SVLS S
Sbjct: 7   GRCAGGGGRLSSVLSLS 23


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 370 GNCSGSGSALDSVLSAS 320
           G C+G G  L SVLS S
Sbjct: 7   GRCAGGGGRLSSVLSLS 23


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 370 GNCSGSGSALDSVLSAS 320
           G C+G G  L SVLS S
Sbjct: 7   GRCAGGGGRLSSVLSLS 23


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 370 GNCSGSGSALDSVLSAS 320
           G C+G G  L SVLS S
Sbjct: 7   GRCAGGGGRLSSVLSLS 23


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 318 PDADKTESKAEPEPE 362
           P  D T S A+PEPE
Sbjct: 19  PTMDSTVSSAKPEPE 33


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 675 YFIYYNFVLRCNIELSSTIP 734
           YFIY+    R  +EL+  IP
Sbjct: 26  YFIYFRISRRHLLELAEKIP 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,534
Number of Sequences: 438
Number of extensions: 3333
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)