Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0309
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 39 0.003
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 39 0.004
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 37 0.012
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 35 0.050
At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil... 34 0.12
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 33 0.15
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 33 0.20
At2g07260.1 68415.m00833 hypothetical protein 33 0.20
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 33 0.27
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 32 0.35
At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein ... 32 0.35
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 32 0.47
At1g08170.1 68414.m00902 histone H2B family protein similar to h... 32 0.47
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 31 0.62
At5g34895.1 68418.m04113 hypothetical protein similar to At2g049... 31 0.82
At3g47270.1 68416.m05135 hypothetical protein similar to At2g049... 31 0.82
At3g32150.1 68416.m04094 hypothetical protein 31 0.82
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 31 0.82
At1g32830.1 68414.m04046 hypothetical protein similar to At2g049... 31 0.82
At5g24630.1 68418.m02909 expressed protein ; expression support... 31 1.1
At4g34440.1 68417.m04894 protein kinase family protein contains ... 31 1.1
At3g28790.1 68416.m03593 expressed protein 31 1.1
At5g40450.1 68418.m04905 expressed protein 30 1.4
At4g33010.1 68417.m04695 glycine dehydrogenase [decarboxylating]... 30 1.4
At5g10490.1 68418.m01215 mechanosensitive ion channel domain-con... 30 1.9
At4g15980.1 68417.m02426 pectinesterase family protein contains ... 30 1.9
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.9
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.9
At3g30450.1 68416.m03852 hypothetical protein similar to At2g049... 29 2.5
At1g71080.1 68414.m08203 expressed protein 29 2.5
At1g12080.2 68414.m01397 expressed protein 29 2.5
At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family... 29 3.3
At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid t... 29 3.3
At2g26080.1 68415.m03131 glycine dehydrogenase [decarboxylating]... 29 3.3
At1g32460.1 68414.m04006 expressed protein 29 3.3
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 29 3.3
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 29 4.4
At1g75800.1 68414.m08805 pathogenesis-related thaumatin family p... 29 4.4
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 28 5.8
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 28 5.8
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 28 5.8
At4g19590.1 68417.m02879 DNAJ heat shock N-terminal domain-conta... 28 5.8
At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein ... 28 5.8
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 7.6
At4g14140.1 68417.m02181 DNA (cytosine-5-)-methyltransferase (ME... 28 7.6
At3g59510.1 68416.m06641 leucine-rich repeat family protein cont... 28 7.6
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +3
Query: 114 KVPE---EVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETL 284
K PE E+ E+ EE P + + PETP EP PE+P+ E+
Sbjct: 416 KAPEPKKEINPPNLEEPSKPKPEESPKPQQPSPK--PETPSHEPSNPKEPKPESPKQESP 473
Query: 285 AADQPVEHVVNPDADKTESKAEPEPEQLPVNGLS--LEQSKTETPE 416
+QP +P + + +A P+PEQ S E SK E P+
Sbjct: 474 KTEQPKPKPESPKQESPKQEA-PKPEQPKPKPESPKQESSKQEPPK 518
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +3
Query: 120 PEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQP 299
PE V+ ++ S+ ET + + PS + E+P E N H P+ + +P
Sbjct: 409 PEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKESPKPQPSKP 468
Query: 300 VEHVVNPDADKTESKAEPEPEQLP 371
E P+ K E +PE Q+P
Sbjct: 469 -EDSPKPEQPKPEESPKPEQPQIP 491
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANEDKTPET---PVTEPITNGHSTPETPQVETLAADQPVEHV 311
T+E ++ + PS++++ +TP+T P +P H +P+ + E +
Sbjct: 401 TSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKES 460
Query: 312 VNPDADKTESKAEPE---PEQLP 371
P K E +PE PE+ P
Sbjct: 461 PKPQPSKPEDSPKPEQPKPEESP 483
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 132 IEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTP-ETPQVETLAADQPVEH 308
+++ S + V+ + PS + E +P P + P N +P +P+ E+LA D P
Sbjct: 89 VDSPLAPSSSPEVDSPQPPSSSPEADSPLPPSSSPEANSPQSPASSPKPESLA-DSPSPP 147
Query: 309 VVNPDADKTESKAEPEPEQLP 371
P + S + PEP +P
Sbjct: 148 PPPPQPESPSSPSYPEPAPVP 168
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 35.1 bits (77), Expect = 0.050
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 177 VKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPE 356
V+T ++ E + + P E TNG P+ + E P +D E +A E
Sbjct: 787 VETKTDGEEQEAAKEPTAESKTNGEEPNAEPETDGKEHKSLKEPNAEPKSDGEEQEAAKE 846
Query: 357 PE-QLPVNGLSLEQSKTETPE 416
P +L +G + E +K T E
Sbjct: 847 PNAELKTDGENQEAAKELTAE 867
>At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin 2
(VLN2) [Arabidopsis thaliana] GI:3415115
Length = 976
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 138 ATAEQSQNETVEEVKTPSEA-NEDKTPETPVTE-PITNGHSTPETPQVETLAADQPVEHV 311
A A SQ E K+P + T P + P+T E +V L A + E
Sbjct: 831 AVAALSQVLVAENKKSPDTSPTRRSTSSNPADDIPLTEAKDEEEASEVAGLEAKE--EEE 888
Query: 312 VNPDADKTESKAEPEPE 362
V+P AD+TE+K E E +
Sbjct: 889 VSPAADETEAKQETEEQ 905
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANED-----KTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
T ++SQ + VE + P E +D +TP + E IT G S +TP + + + +E
Sbjct: 692 TEKESQPQKVETTEVPGETKKDDEDVNQTPLSTQEEEITQGQSNLQTPLTPVMLSQEVME 751
Query: 306 HV 311
+
Sbjct: 752 EI 753
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANEDKTPETPVTE-----PITNGHSTPETPQVETLAADQPVE 305
T S + VE K+P+ +E P TPV E P S +P V AD P
Sbjct: 58 TPTASASSPVESPKSPAPVSESSPPPTPVPESSPPVPAPMVSSPVSSPPVPAPVADSPPA 117
Query: 306 HVVNPDAD 329
V P AD
Sbjct: 118 PVAAPVAD 125
>At2g07260.1 68415.m00833 hypothetical protein
Length = 300
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANED-----KTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
T ++SQ + E K P E +D +TP + E IT G S+ +TP + + + +E
Sbjct: 164 TEKESQPQKEETTKVPKETKKDDEDVNQTPLSTQEEEITQGQSSLQTPLTPVMLSQEVME 223
Query: 306 HV 311
+
Sbjct: 224 EI 225
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 114 KVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETP-VTEPITNGHSTPETPQVETLAA 290
+ P E ++S+ E V E K E E KT E P V E + E P VE +
Sbjct: 85 EAPVETPVVVEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKKPEAEEEKPAVEA-SV 143
Query: 291 DQPVE 305
PVE
Sbjct: 144 TAPVE 148
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 129 VIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEH 308
V+E T + + +V+TP K E PV P+ +T +V ++ VE
Sbjct: 56 VVEETEKPIEETEEAQVETPEVVEIKKDEEAPVETPVV-VEDESKTEEVVEAKKEEEVEE 114
Query: 309 VVNPDAD-KTESKAEPEPEQ 365
+A E + +PE E+
Sbjct: 115 KKTEEAPVVVEEEKKPEAEE 134
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385:
'chromo' (CHRromatin Organization MOdifier)
Length = 2228
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +3
Query: 114 KVPEEVIE-ATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAA 290
+ P E +E A++E +N+TV E++T + + E E + + + +
Sbjct: 245 EAPVEKLEHASSEIVENKTVAEMETGKGKRKKRKRELNDGESLERCKTDKKRAKKSLSKV 304
Query: 291 DQPVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPE 416
+ +P++ K + K ++ + LS QSKTETPE
Sbjct: 305 GSSSQTTKSPESSKKKKKKN----RVTLKSLSKPQSKTETPE 342
>At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 809
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 123 EEVIEATAEQSQNET-VEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQP 299
E+V+ + +Q + T +EE K S AN+D + P TE +TN + + L
Sbjct: 615 EDVMSSLLKQYLDVTQMEEAKPLSNANDDLNKQIPSTEEMTNSEHVAD----QNLPPSNT 670
Query: 300 VEHVVNPDADKTESKAEPEPEQLP 371
+ + K S EPE P
Sbjct: 671 QVEELQDNEQKDSSSLEPEKTTKP 694
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 120 PEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQP 299
P E I + ++ ET ++K E ++ E + E T PE + E +
Sbjct: 60 PPEPITMPSSKTNPET--KLKPDLEIQPEEKKEKVLAEE-TKQKVVPEESKQEVPPEESK 116
Query: 300 VEHVVNPDADKTESKAEPEPE 362
E VV P++ K E+K+E +PE
Sbjct: 117 REVVVQPESAKPETKSESKPE 137
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 120 PEEVIEAT-AEQSQNETV-EEVKT---PSEANEDKTPETPVTEPITNGHSTPETPQVETL 284
PEE E AE+++ + V EE K P E+ + + +P T S PET + ET
Sbjct: 85 PEEKKEKVLAEETKQKVVPEESKQEVPPEESKREVVVQPESAKPETKSESKPETTKPETT 144
Query: 285 AADQP 299
+ +P
Sbjct: 145 SETKP 149
>At1g08170.1 68414.m00902 histone H2B family protein similar to
histone H2B from Chlamydomonas reinhardtii [SP|P54347,
SP|P54346, SP|P50565], Volvox carteri [SP|P16867,
SP|P16868]; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 243
Score = 31.9 bits (69), Expect = 0.47
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +3
Query: 123 EEVIEATAEQSQNETVEEVKTPSEANEDKTPE----TPVTEPITNGHSTPETPQVETLAA 290
++V+E T + + E + AN+ +T + PV E +T E P +L
Sbjct: 15 KKVVEETIKVTVTEEGDPCVITETANDQETQDLTFSIPVGENVTTVEIPVEVPDERSLPV 74
Query: 291 DQPVEHVVNPDADKTESKAEPEPEQLPV 374
+ V V P D+ ES P+P + PV
Sbjct: 75 GENVTTVKIPVDDRDES--SPQPPETPV 100
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 31.5 bits (68), Expect = 0.62
Identities = 26/107 (24%), Positives = 42/107 (39%)
Frame = +3
Query: 96 QMVNRXKVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQV 275
+ +N+ + V E+++ + EE E E+K ET T + P P
Sbjct: 106 EALNKREFTAPVTPVKEEKTEEKKTEEETKEEEKTEEKKEET--TTEVKVEEEKPAVP-- 161
Query: 276 ETLAADQPVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPE 416
AA++ P K+E K E + E S E+ T+T E
Sbjct: 162 ---AAEEEKSSEAAPVETKSEEKPEEKAEVTTEKASSAEEDGTKTVE 205
>At5g34895.1 68418.m04113 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At3g47270, At2g02200
Length = 490
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANED-----KTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
T ++SQ + E + P E +D +TP + E IT G S+ +TP + + + +E
Sbjct: 335 TEKESQPQKEETTEVPRETKKDDEDVNQTPLSTQEEEITQGQSSLQTPLTPVMLSQEVME 394
Query: 306 HV 311
+
Sbjct: 395 EI 396
>At3g47270.1 68416.m05135 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At4g03990,
At5g34895, At2g02200
Length = 671
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 150 QSQNETVEEVKTPSEANEDKTPETPVT---EPITNGHSTPETPQVETLAADQPVEHV 311
Q Q E + EV ++ +++ +TP++ E IT G S+ +TP + + + +E +
Sbjct: 521 QPQKEEITEVPRETKKDDEDVNQTPLSTQEEEITQGQSSLQTPLTPVMLSKEVMEEI 577
>At3g32150.1 68416.m04094 hypothetical protein
Length = 241
Score = 31.1 bits (67), Expect = 0.82
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +3
Query: 120 PEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITN---GHSTPETPQVETLAA 290
P E +E + ET E V P E ET V E G T + ET
Sbjct: 159 PSEPVEPEISVTSVETPEPVVIPPEVPPSTNTETVVIEDDDASDLGIPTEQPVADETNET 218
Query: 291 DQPVEHVVNPDADKTESKAEPEP 359
+ V+P+ +TESK + +P
Sbjct: 219 ETTAIDSVDPEPTQTESKVDKDP 241
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 31.1 bits (67), Expect = 0.82
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Frame = +3
Query: 105 NRXKVPEEVIEATAEQSQNETVEEVKT-----PSEANEDKTPETPVTEPITNGHSTPETP 269
N + EE +EA + +E VEE T P+E E EP+T+ S E
Sbjct: 1848 NAEEKTEEYVEAQQDNEADEPVEESPTETETIPTEEESRDQTEEENQEPLTDMESDKEEG 1907
Query: 270 QVETLAADQPVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPE 416
+++ + E ++ K E +PE L S + +T E
Sbjct: 1908 ELDLDTLEDLEEGTDVASMMRSPEKEEVQPETLATPTQSPSRMETAMEE 1956
>At1g32830.1 68414.m04046 hypothetical protein similar to At2g04970,
At2g15200, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 707
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANED-----KTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
T ++SQ + E + P E +D +TP + E IT G S+ +TP + + + +E
Sbjct: 552 TEKESQPQKEETTEVPRETKKDDEDVNQTPLSTQEEEITQGQSSLQTPLTPVMLSQEVME 611
Query: 306 HV 311
+
Sbjct: 612 EI 613
>At5g24630.1 68418.m02909 expressed protein ; expression supported
by MPSS
Length = 531
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 102 VNRXKVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVET 281
V+ K + V+EAT E+ +TV + K+P + + +TP G+S E + E
Sbjct: 200 VSTEKDADFVLEATEEEPAVKTVRKEKSP-KTKSKSSRKTP-----KEGNSAQEILKTED 253
Query: 282 LAADQPVEHVVNPD-ADKTESKA 347
D + V P+ + KT+SK+
Sbjct: 254 KDTDTTIAEQVTPEKSPKTKSKS 276
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 201 EDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQLPVNG 380
E P +P + P + +P+TP+ + A + V P +T S PE P G
Sbjct: 65 ETSPPTSPSSSPPVVANPSPQTPENPSPPAPEGSTPVTPPAPPQTPSNQSPERPTPPSPG 124
Query: 381 LSLEQSKT 404
+ ++++T
Sbjct: 125 ANDDRNRT 132
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +3
Query: 183 TPSEANEDK-TPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEP 359
TPS TP TP T TP TP T AA + E + K ES ++ E
Sbjct: 282 TPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPSTPAAGKTSEKGSESASMKKESNSKSES 341
Query: 360 EQLPVNGLS 386
E +S
Sbjct: 342 ESAASGSVS 350
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 147 EQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHST-PETPQVETLAADQPV-EHVVNP 320
+Q ++ T+E V P E+ EDK+ E ++E I +T +T +ET D + +V+
Sbjct: 1792 QQEESGTLE-VPKPEESKEDKSQE--ISETIEEIEATSDQTLPIETSHTDNTLSSELVSE 1848
Query: 321 DADKTESKAEPEPEQLPVNGLSLE 392
D++ K E E+ P +E
Sbjct: 1849 QDDQSPKKVEEIHEEEPKEAHDVE 1872
>At4g33010.1 68417.m04695 glycine dehydrogenase [decarboxylating],
putative / glycine decarboxylase, putative / glycine
cleavage system P-protein, putative strong similarity to
SP|P49361 Glycine dehydrogenase [decarboxylating] A,
mitochondrial precursor (EC 1.4.4.2) {Flaveria
pringlei}; contains Pfam profile PF02347: Glycine
cleavage system P-protein
Length = 1037
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 126 EVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNG 248
++I + N +EEV+ +EAN+D VT P T+G
Sbjct: 684 KIITVGTDAKGNINIEEVRKAAEANKDNLAALMVTYPSTHG 724
>At5g10490.1 68418.m01215 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein contains Pfam profile PF00924:
Mechanosensitive ion channel
Length = 519
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = +3
Query: 195 ANEDKTPETPVTEPITNGHSTPETPQ-VETLAADQP--------VEHVVNPDADKTESKA 347
++ +K PE V +P+ S P TP+ ET ++P ++ + D + S A
Sbjct: 387 SDTNKVPEETVAKPVIKAVSKPPTPKDTETSGTEKPKAKRSGGTIKSTKTDETDSSTSSA 446
Query: 348 EPEP-EQLPVNGLSLEQSKTETP 413
E+ V G++LE SK P
Sbjct: 447 SRSTLEENIVLGVALEGSKRTLP 469
>At4g15980.1 68417.m02426 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 701
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANEDKTPETPV---TEPITNGHSTPETPQVETLAADQPVEHV 311
+++ S N ++ K + + TP+ +P+ + S+ + PQ T + +QP++
Sbjct: 269 SSDSSNNRPLDSSKNQQMESSEDTPKKSAFSGNQPLDD--SSDKLPQKSTSSENQPLDSS 326
Query: 312 VNPDADKTESKAEP 353
NP T S+ P
Sbjct: 327 ENPPQKSTSSENRP 340
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +3
Query: 186 PSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQ 365
PS + TP TP P + S TP P H P T S P P
Sbjct: 73 PSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPS--HPTPSH 130
Query: 366 LPVNG 380
P G
Sbjct: 131 PPSGG 135
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +3
Query: 186 PSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQ 365
PS + TP TP P + S TP P H P T S P P
Sbjct: 73 PSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPS--HPTPSH 130
Query: 366 LPVNG 380
P G
Sbjct: 131 PPSGG 135
>At3g30450.1 68416.m03852 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 800
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 150 QSQNETVEEVKTPSEANEDKTPETPV---TEPITNGHSTPETPQVETLAADQPVEHV 311
Q Q E EV ++ +++ +TP+ E IT G S+ +TP + + + +E +
Sbjct: 650 QPQKEETTEVPRETKKDDEDVNQTPLFMQEEEITQGQSSLQTPLTPVMLSQEVMEEI 706
>At1g71080.1 68414.m08203 expressed protein
Length = 326
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 168 VEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVE-TLAADQPVEHVVNPDADKTESK 344
+ V+TP E+ PV ++ ++PQV +L D PVE V + K E+
Sbjct: 112 LRHVRTPGESAAASQSAVPVEHRLSPVGRAAKSPQVNRSLLPDVPVE-VERIEIGKPENS 170
Query: 345 AEP 353
AEP
Sbjct: 171 AEP 173
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Frame = +3
Query: 120 PEEVIEATAEQSQN----ETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLA 287
PEE + A EQ ET EEV +D+ E E ETP VE
Sbjct: 37 PEESVPAVTEQKSEAPIVETNEEVVVEEAEKKDEETEKKTEEKDEKTEVITETPVVE--E 94
Query: 288 ADQPVEHVVNPDADKTESKAEPEPEQLPVNGLSLEQSKTETPE 416
++ E V A E K E+ + E+ E E
Sbjct: 95 EEKKAEEVTETPAVVEEEKKTEVVEEKQTEVAAAEEVAVEKAE 137
>At5g09480.1 68418.m01097 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family members At5g09530,
At5g09520, At1g44222 [Arabidopsis thaliana]
Length = 144
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 144 AEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPD 323
A S + EEVK E E + PE P EP PE P+ + P E V +
Sbjct: 32 ARVSHSLVQEEVKKVPEYTEPEEPEVP-EEPELPSPEEPEIPEEPEI----PEEPEVPGE 86
Query: 324 ADKTESKAEP-EPE 362
+ E EP EPE
Sbjct: 87 PEVPEEPEEPEEPE 100
>At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 208
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 219 TPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQLPVNGLSL 389
TP P++ P T AA P +P +D+T S P P N LS+
Sbjct: 134 TPGASPVSPSAGAPTT---SPSAAKSPETSATSPSSDETPSMTAPSPSSSGTNILSV 187
>At2g26080.1 68415.m03131 glycine dehydrogenase [decarboxylating],
putative / glycine decarboxylase, putative / glycine
cleavage system P-protein, putative strong similarity to
SP|P26969 Glycine dehydrogenase [decarboxylating],
mitochondrial precursor (EC 1.4.4.2) {Pisum sativum};
contains Pfam profile PF02347: Glycine cleavage system
P-protein
Length = 1044
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 126 EVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNG 248
+++ + N +EE++ +EAN+D VT P T+G
Sbjct: 690 KIVAVGTDAKGNINIEELRNAAEANKDNLAALMVTYPSTHG 730
>At1g32460.1 68414.m04006 expressed protein
Length = 92
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 192 EANEDKTPETPVTEPITN-GHSTPETPQVETLAADQPVEHVVNPDADKTESKAEPEPEQL 368
+ +KT + E + +++PE +V T + +PV ++ N A + AE ++L
Sbjct: 3 QPRNNKTSQEQARESLIEISYTSPEEDEVITYSDVKPVTYISNGSAKGNKDDAEKLRDEL 62
Query: 369 PVNGLSLEQSKTETPEVN 422
+S ++S + +P+V+
Sbjct: 63 --ISISYDESPSPSPDVD 78
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 29.1 bits (62), Expect = 3.3
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Frame = +3
Query: 123 EEVI--EATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQ 296
EEV+ EA E+ + E EE + E+K E VTE E P+ ET+ A
Sbjct: 104 EEVVKPEAEVEKKKEEAAEE-----KVEEEKKSEAVVTE---------EAPKAETVEAVV 149
Query: 297 PVEHVVNPDADKTESKAEPE--PEQLPVNGLSLEQSKTETPEV 419
E + + K E E E+ + E+ K ET EV
Sbjct: 150 TEEIIPKEEVTTVVEKVEEETKEEEKKTEDVVTEEVKAETIEV 192
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = +3
Query: 120 PEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQP 299
PE +E E++ E VEE K SEA T E P E + + P+ E +
Sbjct: 109 PEAEVEKKKEEAAEEKVEEEKK-SEAVV--TEEAPKAETVEAVVTEEIIPKEEVTTVVEK 165
Query: 300 VEHVVNPDADKTESKAEPE 356
VE + KTE E
Sbjct: 166 VEEETKEEEKKTEDVVTEE 184
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANED-----KTPETPVTEPITNGHSTPETPQVETLAADQPVE 305
T ++SQ + E + P E +D +TP + E I G S+ +TP + + + +E
Sbjct: 653 TEKESQPQKEETTEVPRETKKDDEDVNQTPLSTQEEEIPQGQSSLQTPLTPVMLSQEVME 712
Query: 306 HV 311
+
Sbjct: 713 EI 714
>At1g75800.1 68414.m08805 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam
profile: PF00314 Thaumatin family
Length = 330
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = +3
Query: 141 TAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNP 320
T +S N + TP+ + + ++P +P T ++ TP ++ PV+ +
Sbjct: 235 TCAESPNYVITFCPTPNTSQKSSQDQSPDPKPTTPTGTSSTTPAGDSSTTWSPVDTSMIY 294
Query: 321 DADKTESKAEPEPEQLPVNGLSL 389
+ ++K P L + G+++
Sbjct: 295 EGALDQNKGSPSTCHLSLCGITV 317
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 ETLAADQPVEHVVNPDADKTESKAEPEPEQ-LPVNGLSLEQSKTETPEV 419
E A PVE V P+A+ + + AE E +P S E +ETP+V
Sbjct: 359 EEEAEKPPVETPVEPEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKV 407
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 123 EEVIEATAEQSQNET-VEEVKTP--SEANEDKTPETPVTE-PITNGHSTPETPQVE 278
EE++E T + ET V E K P E E+ TP V E P+ +T P E
Sbjct: 166 EEIVEETKKGETPETAVVEEKKPEVEEKKEEATPAPAVVETPVKEPETTTTAPVAE 221
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 123 EEVIEATAEQSQNET-VEEVKTP--SEANEDKTPETPVTE-PITNGHSTPETPQVE 278
EE++E T + ET V E K P E E+ TP V E P+ +T P E
Sbjct: 166 EEIVEETKKGETPETAVVEEKKPEVEEKKEEATPAPAVVETPVKEPETTTTAPVAE 221
>At4g19590.1 68417.m02879 DNAJ heat shock N-terminal
domain-containing protein protein YJL162c, Saccharomyces
cerevisiae, PIR2:S56945; contains Pfam PF00226: DnaJ
domain;
Length = 345
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 156 QNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQPVEHVVNPDADKT 335
Q + EVK + + P+ P +P + + P + +QP + +
Sbjct: 118 QKRKLNEVKPKRSRKQKQPPKKPPNQPKQQPNQQKQPPDQQKQPPNQPRQPPNQQKQPQN 177
Query: 336 ESKAEP-EPEQLPVNGLSLEQSKTETP 413
E K P +P+Q P + +++++ P
Sbjct: 178 EPKQPPNQPKQPPNQASTNGRARSKKP 204
>At3g18620.1 68416.m02366 zinc finger (DHHC type) family protein
contains Pfam profile: PF01529 DHHC zinc finger domain
Length = 345
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 418 TSGVSVLDCSKESPLTGNCSGSGS 347
T G+ VLD P GNC G+G+
Sbjct: 166 TCGMCVLDMDHHCPFIGNCVGAGN 189
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 117 VPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAADQ 296
V E V E + + ++EE PS TP T N T TP+ T A +
Sbjct: 1228 VTETVSEPPPVEKEETSLEEKSDPSS-----TPNTETATSTENTSQTTTTPESVTTAPPE 1282
Query: 297 PV 302
P+
Sbjct: 1283 PI 1284
>At4g14140.1 68417.m02181 DNA (cytosine-5-)-methyltransferase
(METII) nearly identical to cytosine-5 methyltransferase
(METII) [Arabidopsis thaliana] GI:6523846
Length = 1519
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 114 KVPEEVIEATAEQSQNETVEEVKTPSEANEDKTPETPVTEPITNGHSTPETPQVETLAAD 293
+VP E I A E + E +EEV+ E NE+ PE E + +S P +++ ++ D
Sbjct: 632 EVPSEAINA--ENVEEEELEEVEEEDE-NEEDDPEENELEAVEIQNS-PTPKKIKGISED 687
Query: 294 QPVE 305
++
Sbjct: 688 MEIK 691
>At3g59510.1 68416.m06641 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 419
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 158 LRLFSSCFNHLFGNLXPVHHL 96
LR S CFN L G + P+H L
Sbjct: 237 LRTLSLCFNSLAGRISPLHRL 257
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,883,093
Number of Sequences: 28952
Number of extensions: 238472
Number of successful extensions: 992
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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