Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0308
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   1.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.5  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   5.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -3

Query: 500 SKVFGDDDIEVNEVKKTDK 444
           SKVFG+D+  + ++ K++K
Sbjct: 100 SKVFGNDEKALEQIAKSEK 118


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -3

Query: 500 SKVFGDDDIEVNEVKKTDK 444
           SKVFG+D+  + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -3

Query: 500 SKVFGDDDIEVNEVKKTDK 444
           SKVFG+D+  + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 692  TNVSTYKSDAGVETIKLELQETLISWISNGV 600
            T  +TYK D  +  + + L   +I+W   GV
Sbjct: 1315 TFTTTYKEDVTLPCLAVGLPPPVITWKIKGV 1345


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 311 TPQPDTVRDTLAYIP 267
           TP+PD + + L ++P
Sbjct: 353 TPEPDCIHELLGHMP 367


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 497 KVFGDDDIEVNEVKKTDK 444
           KVFG+D+  + ++ K++K
Sbjct: 1   KVFGNDEKALEQIAKSEK 18


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 381 LRIRSAIKMDPY*T 340
           LR+R  IK+DP+ T
Sbjct: 175 LRLREEIKVDPFMT 188


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 116 KLNKYQRIKGIFCFFFSIFNL 54
           + N YQ +      FF++FN+
Sbjct: 515 RFNNYQSLAHYLRVFFTVFNV 535


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,766
Number of Sequences: 336
Number of extensions: 2865
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)