Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0308
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC141815-1|AAI41816.1| 647|Homo sapiens Wolf-Hirschhorn syndrom... 30 6.9
BC070176-1|AAH70176.1| 152|Homo sapiens WHSC1 protein protein. 30 6.9
AL132868-5|CAM15222.1| 647|Homo sapiens Wolf-Hirschhorn syndrom... 30 6.9
AF178206-1|AAF23369.1| 647|Homo sapiens MMSET type I protein. 30 6.9
AF083390-1|AAD19345.1| 647|Homo sapiens putative WHSC1 protein ... 30 6.9
AF083389-1|AAD19344.1| 647|Homo sapiens putative WHSC1 protein ... 30 6.9
AF071594-1|AAC24151.1| 647|Homo sapiens MMSET type I protein. 30 6.9
M82809-1|AAA51740.1| 321|Homo sapiens annexin IV (placental ant... 30 9.1
M19383-1|AAC41689.1| 321|Homo sapiens protein PP4-X protein. 30 9.1
D78152-1|BAA11227.1| 321|Homo sapiens annexin IV (carbohydrtate... 30 9.1
CR407681-1|CAG28609.1| 321|Homo sapiens ANXA4 protein. 30 9.1
BC011659-1|AAH11659.1| 321|Homo sapiens annexin A4 protein. 30 9.1
BC000182-1|AAH00182.1| 321|Homo sapiens annexin A4 protein. 30 9.1
AY453398-1|AAS47515.1| 321|Homo sapiens proliferation-inducing ... 30 9.1
AC019206-1|AAY14864.1| 321|Homo sapiens unknown protein. 30 9.1
>BC141815-1|AAI41816.1| 647|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 647
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 227 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 126
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>BC070176-1|AAH70176.1| 152|Homo sapiens WHSC1 protein protein.
Length = 152
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 227 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 126
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 101 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 135
>AL132868-5|CAM15222.1| 647|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 647
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 227 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 126
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF178206-1|AAF23369.1| 647|Homo sapiens MMSET type I protein.
Length = 647
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 227 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 126
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF083390-1|AAD19345.1| 647|Homo sapiens putative WHSC1 protein
protein.
Length = 647
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 227 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 126
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF083389-1|AAD19344.1| 647|Homo sapiens putative WHSC1 protein
protein.
Length = 647
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 227 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 126
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF071594-1|AAC24151.1| 647|Homo sapiens MMSET type I protein.
Length = 647
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 227 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 126
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>M82809-1|AAA51740.1| 321|Homo sapiens annexin IV (placental
anticoagulant protein II) protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELRRAMKG 103
>M19383-1|AAC41689.1| 321|Homo sapiens protein PP4-X protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELQRAMKG 103
>D78152-1|BAA11227.1| 321|Homo sapiens annexin IV
(carbohydrtate-binding protein p33/41) protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELRRAMKG 103
>CR407681-1|CAG28609.1| 321|Homo sapiens ANXA4 protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELRRAMKG 103
>BC011659-1|AAH11659.1| 321|Homo sapiens annexin A4 protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELRRAMKG 103
>BC000182-1|AAH00182.1| 321|Homo sapiens annexin A4 protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELRRAMKG 103
>AY453398-1|AAS47515.1| 321|Homo sapiens proliferation-inducing
protein 28 protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELRRAMKG 103
>AC019206-1|AAY14864.1| 321|Homo sapiens unknown protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 139 ISGNDVKVVVASLYPTALSDASEVFRALSG 228
+SGN +V+V + PT L D E+ RA+ G
Sbjct: 74 LSGNFEQVIVGMMTPTVLYDVQELRRAMKG 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,237,916
Number of Sequences: 237096
Number of extensions: 1425022
Number of successful extensions: 2301
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2301
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -