Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0307
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.4  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    24   5.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.6  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 540 RRELAKFRDSRWEDNWDTRAKKIFE 614
           RRE A+F   R    WDT    I++
Sbjct: 799 RREFARFEKERMMAKWDTGENPIYK 823


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 536 PVGERDLLGVVGEAGEPVHD 477
           P GE  LLG  G +GEP  D
Sbjct: 632 PKGEPGLLGPPGPSGEPGRD 651


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = +1

Query: 13  NRXHMLVRMARSTERFFGQSSHFNLCVTYAMKEDLLQNWNINAAVLYDRPPKIFKP 180
           N  H+L+ +       F +S      VT AM++ +   W+     ++ R  + F P
Sbjct: 379 NSGHVLLSLVHDPREDFLESFGVMGDVTTAMRDPVFYRWHTFVDSIFQRHKQRFAP 434


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = +1

Query: 13   NRXHMLVRMARSTERFFGQSSHF-NLCVTYAMKEDLLQNWNINAAVLYDRPPKIFKPLTL 189
            N  H+++   +    F+GQ SHF N    Y  K    ++  I     +    ++F    L
Sbjct: 1681 NCWHVVLHTVKPDYYFYGQDSHFMNSDYEYNWKNGFGEDEQITILARHGEDNQLFLKAIL 1740

Query: 190  --LEKHDWYVK-MAQNYPMFGASKHEKPNEAFEKTAFTEYVD 306
               +++D+ +  +   + +     + KP +  EK A   Y +
Sbjct: 1741 GQYKQNDYNIDIIPHGHELPMVYINGKPQQIHEKYAVEMYTN 1782


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,806
Number of Sequences: 2352
Number of extensions: 11386
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)