Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0304
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    24   1.5  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   1.5  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    24   1.5  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    24   1.5  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    24   1.5  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    24   1.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   6.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   6.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   6.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   6.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   6.0  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   6.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   6.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.0  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 119 RDATDDQVTIDSAHAILKHNVGIK-CATI 202
           RDAT D     S H +LK  +G + C T+
Sbjct: 57  RDATQDGTPCISRHPVLKSLIGSEDCLTL 85


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 119 RDATDDQVTIDSAHAILKHNVGIK-CATI 202
           RDAT D     S H +LK  +G + C T+
Sbjct: 57  RDATQDGTPCISRHPVLKSLIGSEDCLTL 85


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 119 RDATDDQVTIDSAHAILKHNVGIK-CATI 202
           RDAT D     S H +LK  +G + C T+
Sbjct: 57  RDATQDGTPCISRHPVLKSLIGSEDCLTL 85


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 119 RDATDDQVTIDSAHAILKHNVGIK-CATI 202
           RDAT D     S H +LK  +G + C T+
Sbjct: 57  RDATQDGTPCISRHPVLKSLIGSEDCLTL 85


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 119 RDATDDQVTIDSAHAILKHNVGIK-CATI 202
           RDAT D     S H +LK  +G + C T+
Sbjct: 56  RDATQDGTPCISRHPVLKSLIGSEDCLTL 84


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 119 RDATDDQVTIDSAHAILKHNVGIK-CATI 202
           RDAT D     S H +LK  +G + C T+
Sbjct: 29  RDATQDGTPCISRHPVLKSLIGSEDCLTL 57


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 716 NDARTISWLHQT*SCSHSEKLLR 648
           N  +TISWL       H+E +LR
Sbjct: 354 NPIKTISWLKDGHPIDHNEAVLR 376


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 315 HNIGSRNTVPPKMLRIVPFGLSHIF 241
           H++G  NTV P  LR   + + HIF
Sbjct: 12  HSLG--NTVTPVSLRFKLYTIVHIF 34


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 538 VLCPFQFSGSFTEKMASIPVYEEYHFETLRW 630
           ++ PF   G F   ++SIP+Y ++    L W
Sbjct: 564 LVIPFLLFGGFFLNVSSIPIYFKW-LSFLSW 593


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 538 VLCPFQFSGSFTEKMASIPVYEEYHFETLRW 630
           ++ PF   G F   ++SIP+Y ++    L W
Sbjct: 564 LVIPFLLFGGFFLNVSSIPIYFKW-LSFLSW 593


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 109 AQVKVKTIHLNIWKYQSLFDLSPHDACHLIT 17
           A + +   H++ + +   FDL P    HL T
Sbjct: 282 ASMNIVPYHMSPYGHPYQFDLHPSQFAHLAT 312


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 109 AQVKVKTIHLNIWKYQSLFDLSPHDACHLIT 17
           A + +   H++ + +   FDL P    HL T
Sbjct: 282 ASMNIVPYHMSPYGHPYQFDLHPSQFAHLAT 312


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 26  MTRIMWAKIKERLIFPYVKVDCLYFDLG 109
           +T I  A  K   + PY  ++CL + +G
Sbjct: 202 VTHITMAHFKIIQVVPYCYINCLIYLIG 229


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 109 AQVKVKTIHLNIWKYQSLFDLSPHDACHLIT 17
           A + +   H++ + +   FDL P    HL T
Sbjct: 282 ASMNIVPYHMSPYGHPYQFDLHPSQFAHLAT 312


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 109 AQVKVKTIHLNIWKYQSLFDLSPHDACHLIT 17
           A + +   H++ + +   FDL P    HL T
Sbjct: 238 ASMNIVPYHMSPYGHPYQFDLHPSQFAHLAT 268


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 109 AQVKVKTIHLNIWKYQSLFDLSPHDACHLIT 17
           A + +   H++ + +   FDL P    HL T
Sbjct: 282 ASMNIVPYHMSPYGHPYQFDLHPSQFAHLAT 312


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 109 AQVKVKTIHLNIWKYQSLFDLSPHDACHLIT 17
           A + +   H++ + +   FDL P    HL T
Sbjct: 70  ASMNIVPYHMSPYGHPYQFDLHPSQFAHLAT 100


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 109 AQVKVKTIHLNIWKYQSLFDLSPHDACHLIT 17
           A + +   H++ + +   FDL P    HL T
Sbjct: 282 ASMNIVPYHMSPYGHPYQFDLHPSQFAHLAT 312


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 346 DETYCDR 366
           DETYCDR
Sbjct: 38  DETYCDR 44


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 291 QYSANRYCVRVSRGLCLVGRNLL 359
           +Y   R  + ++  LCL  +NL+
Sbjct: 243 RYLTRRRRIEIAHALCLTNKNLV 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,048
Number of Sequences: 336
Number of extensions: 4420
Number of successful extensions: 32
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)