Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0299
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q13606 Cluster: Olfactory receptor 5I1; n=40; Theria|Re...    33   5.7  
UniRef50_UPI0000D56570 Cluster: PREDICTED: similar to CG4797-PB,...    33   9.9  

>UniRef50_Q13606 Cluster: Olfactory receptor 5I1; n=40; Theria|Rep:
           Olfactory receptor 5I1 - Homo sapiens (Human)
          Length = 314

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = +1

Query: 316 LCTIVLVWS*QFIKLSLLKI*YFKGQTLSQSSCVRHCVA*SI*PR*ALFDWRKSYGFASP 495
           +C I+++ S  FI LS+LKI  F G+  + S+C  H  + +I     LF + +     SP
Sbjct: 211 ICFIIIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTSVTIYQGTLLFIYSRPSYLYSP 270

Query: 496 TCVKAV 513
              K +
Sbjct: 271 NTDKII 276


>UniRef50_UPI0000D56570 Cluster: PREDICTED: similar to CG4797-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG4797-PB, isoform B - Tribolium castaneum
          Length = 493

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
 Frame = -3

Query: 496 WVTRNHKIFSNQKVLNGAK*TTQRNVSRMTIETKFAL*NIIFLKVTIL*IVMTKLELSCI 317
           W+ ++ +IF NQ  L     T+ +N  +  I+  F   ++++    IL ++    +LSC 
Sbjct: 236 WLYKDPQIFENQLRLLD---TSAKNRRKSRIDWSFYKESVVYKPFFILFVIFVIQQLSCG 292

Query: 316 VFFIRLSAKMFR*RFGG---NATSEVVRIVLL 230
              I  +  +FR   GG   N   E V +VLL
Sbjct: 293 YVIIFYAVDLFR-EIGGHFRNGLDEFVALVLL 323


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,707,433
Number of Sequences: 1657284
Number of extensions: 12649433
Number of successful extensions: 21814
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21813
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)