Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0297
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L09234-1|AAA35578.1|  615|Homo sapiens ATPase protein.                248   1e-65
L09235-1|AAA83249.1|  617|Homo sapiens ATPase protein.                225   1e-58
BT006672-1|AAP35318.1|  617|Homo sapiens ATPase, H+ transporting...   225   1e-58
BC013138-1|AAH13138.1|  617|Homo sapiens ATPase, H+ transporting...   225   1e-58
AF113129-1|AAF14870.1|  617|Homo sapiens vacuolar ATPase isoform...   225   1e-58

>L09234-1|AAA35578.1|  615|Homo sapiens ATPase protein.
          Length = 615

 Score =  248 bits (608), Expect = 1e-65
 Identities = 117/130 (90%), Positives = 124/130 (95%)
 Frame = +3

Query: 3   DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITF 182
           DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYS YDRFCPFYKTVGMLKN+I F
Sbjct: 486 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSPYDRFCPFYKTVGMLKNMIAF 545

Query: 183 YDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLED 362
           YDMSRHAVESTAQS+NK+TWNVIRD+MGN+LYQLSSMKFKDPVKDGE KIKADF+QL ED
Sbjct: 546 YDMSRHAVESTAQSENKITWNVIRDSMGNILYQLSSMKFKDPVKDGEAKIKADFEQLHED 605

Query: 363 MSAAFRNLED 392
           +  AFRNLED
Sbjct: 606 IQQAFRNLED 615


>L09235-1|AAA83249.1|  617|Homo sapiens ATPase protein.
          Length = 617

 Score =  225 bits (551), Expect = 1e-58
 Identities = 103/130 (79%), Positives = 120/130 (92%)
 Frame = +3

Query: 3   DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITF 182
           DL+EIVQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I F
Sbjct: 488 DLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAF 547

Query: 183 YDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLED 362
           YDM+R AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLED
Sbjct: 548 YDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLED 607

Query: 363 MSAAFRNLED 392
           M  AFR+LED
Sbjct: 608 MQNAFRSLED 617


>BT006672-1|AAP35318.1|  617|Homo sapiens ATPase, H+ transporting,
           lysosomal 70kDa, V1 subunit A, isoform 1 protein.
          Length = 617

 Score =  225 bits (551), Expect = 1e-58
 Identities = 103/130 (79%), Positives = 120/130 (92%)
 Frame = +3

Query: 3   DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITF 182
           DL+EIVQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I F
Sbjct: 488 DLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAF 547

Query: 183 YDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLED 362
           YDM+R AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLED
Sbjct: 548 YDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLED 607

Query: 363 MSAAFRNLED 392
           M  AFR+LED
Sbjct: 608 MQNAFRSLED 617


>BC013138-1|AAH13138.1|  617|Homo sapiens ATPase, H+ transporting,
           lysosomal 70kDa, V1 subunit A protein.
          Length = 617

 Score =  225 bits (551), Expect = 1e-58
 Identities = 103/130 (79%), Positives = 120/130 (92%)
 Frame = +3

Query: 3   DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITF 182
           DL+EIVQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I F
Sbjct: 488 DLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAF 547

Query: 183 YDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLED 362
           YDM+R AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLED
Sbjct: 548 YDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLED 607

Query: 363 MSAAFRNLED 392
           M  AFR+LED
Sbjct: 608 MQNAFRSLED 617


>AF113129-1|AAF14870.1|  617|Homo sapiens vacuolar ATPase isoform
           VA68 protein.
          Length = 617

 Score =  225 bits (551), Expect = 1e-58
 Identities = 103/130 (79%), Positives = 120/130 (92%)
 Frame = +3

Query: 3   DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITF 182
           DL+EIVQLVGKASLAETDKITLEVAKL+KDDFLQQN Y+ YDRFCPFYKTVGML N+I F
Sbjct: 488 DLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAF 547

Query: 183 YDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLED 362
           YDM+R AVE+TAQSDNK+TW++IR+ MG++LY+LSSMKFKDP+KDGE KIK+D+ QLLED
Sbjct: 548 YDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSDYAQLLED 607

Query: 363 MSAAFRNLED 392
           M  AFR+LED
Sbjct: 608 MQNAFRSLED 617


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,160,051
Number of Sequences: 237096
Number of extensions: 1906674
Number of successful extensions: 4827
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4802
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)