Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0297
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 224 7e-59
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 34 0.14
CU457740-7|CAM36337.1| 363|Caenorhabditis elegans Hypothetical ... 31 0.96
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 31 1.3
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 29 3.9
AL161712-7|CAC70132.1| 235|Caenorhabditis elegans Hypothetical ... 29 3.9
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 28 6.8
AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical ... 28 6.8
Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 8.9
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 28 8.9
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 224 bits (547), Expect = 7e-59
Identities = 100/130 (76%), Positives = 120/130 (92%)
Frame = +3
Query: 3 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITF 182
DLSEIVQLVGKASLAE+DK+TLEVAK++KDDFLQQN Y+ YDRFCPFYKTVGMLKN+I F
Sbjct: 477 DLSEIVQLVGKASLAESDKVTLEVAKIIKDDFLQQNGYTKYDRFCPFYKTVGMLKNMIGF 536
Query: 183 YDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKDPVKDGEPKIKADFDQLLED 362
YD++RHAVE+TAQSDNK+TWNVI+D+MG+++YQLS+MKFKDPV DGE KI+ D++ L E
Sbjct: 537 YDLARHAVEATAQSDNKITWNVIKDSMGDLIYQLSAMKFKDPVADGEAKIRKDYEDLAEA 596
Query: 363 MSAAFRNLED 392
M+ AFRNLED
Sbjct: 597 MANAFRNLED 606
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 155 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 265
GH EHHH H G H A GH H HG
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHG 492
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +2
Query: 155 GHAEEHHHVLRHVAARG-----GVH-GAVRQQGHVERHPRRHGQRALPALLHEVQG 304
GH EHHH H G GVH G GH P HG + H G
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +2
Query: 155 GHAEEHHHVLRHVAARG--GVHGAVRQQGHVERHPRRHGQ 268
GH EHHH H G G H H H HG+
Sbjct: 527 GHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE 566
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 155 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 265
GH EHHH H HG GH P HG
Sbjct: 427 GHHGEHHHAPAH-------HGHHESHGHGHHSPAHHG 456
>CU457740-7|CAM36337.1| 363|Caenorhabditis elegans Hypothetical
protein C50E10.7 protein.
Length = 363
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 520 IIFATTHKISFGHSEYFLFTLKLISVNFSVSITIIF*RQYSV*SSRLRK 374
IIF TT+ I F ++ + L+ +N S I RQYS+ RL K
Sbjct: 175 IIFTTTYLIFFNKLQFIPIIIFLVVINTSAMIGFFLNRQYSLKILRLFK 223
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 GHAEEHHHVLRHVAAR-GGVHGAVRQQGHVERHPRRHG 265
GH + HHH H GG HG + H E H HG
Sbjct: 44 GHVDTHHHEESHHGEHHGGHHGVQHYESHHESH--HHG 79
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/83 (30%), Positives = 26/83 (31%)
Frame = +2
Query: 17 RAAGRQGVPRGN*QDHARGRQAAQRRLPATEQLFVVRSLLPVLQDGGHAEEHHHVLRHVA 196
R R G P G H G + P RS P GH H H
Sbjct: 339 RHGSRSGSPGGR---HGHGGRHGPPHCPGRHGRHGSRSHSP----RGHGHGGRHGPPHCP 391
Query: 197 ARGGVHGAVRQQGHVERHPRRHG 265
R G HG H R P RHG
Sbjct: 392 GRHGHHGPPHHHHHDGRSPSRHG 414
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = -2
Query: 703 FFYRLKFXKWNRYLYFNHYTCNYS*M*QRNTIIY*H*NFNSIITLHSFVRN*SRCCDDKI 524
F R++ + + Y H C+ + + +IY N + +H + + C +
Sbjct: 72 FGMRVELPADDPFGYDKHGVCSVTPEEEFKVVIY----GNHLDKIHQIIWTFTNNCSEPA 127
Query: 523 SIIFATTH-KISFGHSEYFLFTLKLI 449
+I A H K+ F H F TLKL+
Sbjct: 128 YVIDALNHFKVHFNHKATFHLTLKLL 153
>AL161712-7|CAC70132.1| 235|Caenorhabditis elegans Hypothetical
protein Y66D12A.10 protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 574 TLHSFVRN*SRCCDDKISIIFATTHKISFGHSEYFLFTLKLISVNFSVSITII 416
T HS+ R +CCDD++ ++ IS H + V SV++ +I
Sbjct: 93 TGHSYARIFGKCCDDRLRMVHVQDAYISAHHQLVNFVRFCELVVPLSVNLLVI 145
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1 RTCPKSCSWSARRPSRKLTRSRSRSPSCSKTTS 99
R+ +S S S RR K TRSRSRS S S++++
Sbjct: 72 RSRSRSRSKSTRRSRSKSTRSRSRSRSRSRSST 104
>AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical
protein Y76B12C.6 protein.
Length = 487
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 203 GGVHGAVRQQGHVERHPRRHGQR 271
GG+HGA +QQ V + P H Q+
Sbjct: 443 GGIHGAQQQQQAVRKRPDSHQQQ 465
>Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical
protein F08G5.6 protein.
Length = 345
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 72 VAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVESTAQSDNKVT 239
VAK + + ++ YD F+ G L+N + Y M++ ++ NKVT
Sbjct: 165 VAKERMSISIAYSGWTPYDNLYNFFLIEGDLENPLAIYRMTQFLYQNYISKGNKVT 220
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 541 CCDDKIS--IIFATTHKISFGHSEYFLFTLKLI 449
CC D + +IF+ T ++F H +FL +K I
Sbjct: 226 CCFDNVVSLLIFSVTSSVTFTHDAFFLTMVKSI 258
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 541 CCDDKIS--IIFATTHKISFGHSEYFLFTLKLI 449
CC D + +IF+ T ++F H +FL +K I
Sbjct: 226 CCFDNVVSLLIFSVTSSVTFTHDAFFLTMVKSI 258
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 3 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSY--DRFCPFYKTVGMLK 167
D + + + K ++ D +TL L D L +SYSS+ D FY V +LK
Sbjct: 320 DYGDAISVGKKTPISPPDGVTLPFLSLEAHDLLVTSSYSSFQQDLESWFYVIVDLLK 376
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 3 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSY--DRFCPFYKTVGMLK 167
D + + + K ++ D +TL L D L +SYSS+ D FY V +LK
Sbjct: 320 DYGDAISVGKKTPISPPDGVTLPFLSLEAHDLLVTSSYSSFQQDLESWFYVIVDLLK 376
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.9
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Frame = +3
Query: 42 LAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVESTAQ 221
+ E K+ +E +K+ +++F ++ Y D+ T+ M + I+ +H + T +
Sbjct: 8 MTEFQKLRVETSKI-QNEFREKPGYVE-DKL--HKNTLEMCQKILK----KQHGFQKTQE 59
Query: 222 SDNKVTWNVIRDAMGNVLYQLSSMK-------------FKDPVKDGEPKIKADFDQLLED 362
+ NK ++I D + +V + S MK + D +K KI+A ++L+ED
Sbjct: 60 NQNKFIEHLILD-LESVKKETSDMKKQQETQILKRQDEYHDEMKQEFQKIQATQNKLIED 118
Query: 363 MSAAFRNLE 389
+ + +NLE
Sbjct: 119 LMNSDKNLE 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,411,791
Number of Sequences: 27780
Number of extensions: 331291
Number of successful extensions: 1009
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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