Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0296
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008502-1|AAH08502.1| 99|Homo sapiens chromosome 4 open readi... 70 8e-12
X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 prot... 31 4.4
AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 4.4
AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 4.4
AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 4.4
AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 4.4
AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 4.4
AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 4.4
AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 4.4
AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2 pr... 31 4.4
>BC008502-1|AAH08502.1| 99|Homo sapiens chromosome 4 open reading
frame 34 protein.
Length = 99
Score = 70.1 bits (164), Expect = 8e-12
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +1
Query: 250 DPCECLWNHELAMRRLISLLRQGQSYCTESECLEQLPG 363
DPCEC+ +HE AMRRLI+LLRQ QSYCT++ECL++LPG
Sbjct: 7 DPCECVCSHEHAMRRLINLLRQSQSYCTDTECLQELPG 44
>X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 protein.
Length = 4967
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4474 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4508
>AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4472 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4506
>AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4472 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4506
>AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4472 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4506
>AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4472 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4506
>AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4472 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4506
>AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4472 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4506
>AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4472 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4506
>AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 53 EAP-SIXWKNVVAIVDNLLNIFISNYFNKRXYCSF 154
E P S WK ++A LLN F N++N R F
Sbjct: 4474 EVPESAFWKKIIAYQQKLLNYFARNFYNMRMLALF 4508
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,578,412
Number of Sequences: 237096
Number of extensions: 1658493
Number of successful extensions: 3759
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3759
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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