Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0295
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    26   0.37 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.49 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 187 VPALFHQACLFCIGIREVAFLAYVCSIGDLILVFVTAI 74
           +P +    C F IG+    F  Y+ + G +ILV   AI
Sbjct: 505 IPVILTSVCYFMIGLNSQGFRFYI-ACGIMILVANVAI 541


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -2

Query: 209 CHQLQCKSTSPFSPG----LPLLYWDS*SSLPRLRVFHRRFDTRICNC 78
           C Q  C   +P +P     L LLY D  + LP+  +FH   D     C
Sbjct: 338 CIQPPCGQLNPINPNVFDVLKLLYNDIVNMLPKGEIFHMGGDEVYIPC 385


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 187 VPALFHQACLFCIGIREVAFLAYVCSIGDLILVFVTAI 74
           +P      C F IG+    F  Y+ + G +ILV   AI
Sbjct: 505 IPVTLTSVCYFMIGLNSHGFRFYI-ACGIMILVANVAI 541


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 634 KICIRSFKHYLLFTVTWIVLFL 569
           ++C   +  ++L  V WIVL L
Sbjct: 292 EVCNAGYLPFILLQVAWIVLHL 313


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 251 GSQSCRPSSGRC 216
           GS  CR ++GRC
Sbjct: 93  GSAPCRKNTGRC 104


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +2

Query: 215  YTVHYWADK 241
            +T+HYW +K
Sbjct: 2046 FTIHYWIEK 2054


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 181 ALFHQACLFCIGIREVAFLAYVCSI 107
           A  H   +F +GI   A + Y+C +
Sbjct: 628 AWLHLLYIFLVGIMYAADVFYICHV 652


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,156
Number of Sequences: 336
Number of extensions: 3275
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)