Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0294
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   3.3  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.6  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   7.6  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 612 DHLPTPPPVPAAIQ 653
           D  PTPPP+PA  +
Sbjct: 800 DRTPTPPPLPATAE 813


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 554 WQSLHRPLLGRQDWLPCLRGP 616
           W    R  L +  W PC RGP
Sbjct: 29  WYMHGRNTLRQMRWPPCYRGP 49


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 185 EPAYPVETSKYVERSTQADPADKHLSPKQLRP 280
           EPA+   T +Y   +   DPAD  L    L P
Sbjct: 150 EPAFHPLTDEYSNAAVCIDPADGRLKRNLLCP 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,768
Number of Sequences: 2352
Number of extensions: 17724
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)