Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0293
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   2.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.8  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   7.6  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 609  WYWGGITSSEAEXLLAGQHDNVFLVRDS 692
            WY   I+  EA  LL       F+VRDS
Sbjct: 1219 WYKPNISREEAIALLRNAAPGTFIVRDS 1246


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 331 FGRVNFL*RPASDPYKDISVNHEGLI 408
           F + NFL     + +++ +VNH+G+I
Sbjct: 299 FSKENFLATLHGEGFREKAVNHQGMI 324


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 331 SFTNLLVFRDELGSGIRIASTISIFVSLFLSIL 233
           SF  +LVF     SG +++ +ISI +SL +  L
Sbjct: 254 SFLTILVFYLPSDSGEKVSLSISILLSLTVFFL 286


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 331 SFTNLLVFRDELGSGIRIASTISIFVSLFLSIL 233
           SF ++LVF     SG +I+  ISI +SL +  L
Sbjct: 254 SFLSVLVFYLPSDSGEKISLCISILLSLTVFFL 286


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,432
Number of Sequences: 2352
Number of extensions: 14317
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)