Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0289
         (600 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56DC2 Cluster: PREDICTED: similar to CG6192-PA;...    46   0.001
UniRef50_Q4Q2U2 Cluster: Putative uncharacterized protein; n=4; ...    36   0.73 
UniRef50_Q5TQG3 Cluster: ENSANGP00000027134; n=2; Culicidae|Rep:...    36   0.97 
UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3; ...    33   5.1  
UniRef50_A6G9K2 Cluster: Sporulation protein, amidase enhancer; ...    33   6.8  
UniRef50_UPI0000EB01D5 Cluster: UPI0000EB01D5 related cluster; n...    32   9.0  
UniRef50_Q0DBX3 Cluster: Os06g0517400 protein; n=8; Oryza sativa...    32   9.0  

>UniRef50_UPI0000D56DC2 Cluster: PREDICTED: similar to CG6192-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG6192-PA - Tribolium castaneum
          Length = 606

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = +1

Query: 430 RSQGAFEVYRRASREPSADTEPDVK-----ALQEQNAVLHRVCRALIAELADVQRDRQLL 594
           R  GAFEVYR+ ++      +   K      LQE+N VL R+C+ L  ELAD++ ++  L
Sbjct: 536 RKHGAFEVYRKPAKNQEGGQDEKAKWELFQMLQEENTVLLRICQELSQELADIREEKMTL 595



 Score = 34.7 bits (76), Expect = 1.7
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 GALPPPPTREPIVAADEGPASXXXXXXXXXXXXXXXXXXX--NHARSSSLDLTRL 330
           GA+PPPPT +     DEGP S                     +H RSSSLDL RL
Sbjct: 415 GAIPPPPTTQ---TGDEGPVSLPVFPPPKKEKPPPPPPRPFKSHGRSSSLDLNRL 466


>UniRef50_Q4Q2U2 Cluster: Putative uncharacterized protein; n=4;
            Leishmania|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 4395

 Score = 35.9 bits (79), Expect = 0.73
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +1

Query: 415  REDAARSQGAFEVYRRASREPSADTEPDVKALQEQNAVLHRVCRALIAELADVQR 579
            REDAAR   A E    A      D   ++KA++ QN  L  +C    A LAD+++
Sbjct: 1078 REDAARGVAAIEDNAAALESELLDVLAELKAMKGQNDALKALCEMKDAALADLEK 1132



 Score = 35.9 bits (79), Expect = 0.73
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +1

Query: 415  REDAARSQGAFEVYRRASREPSADTEPDVKALQEQNAVLHRVCRALIAELADVQR 579
            REDAAR   A E    A      D   ++KA++ QN  L  +C    A LAD+++
Sbjct: 2257 REDAARGVAAIEDNAAALESELLDVLAELKAMKGQNDALKALCEMKDAALADLEK 2311



 Score = 35.9 bits (79), Expect = 0.73
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +1

Query: 415  REDAARSQGAFEVYRRASREPSADTEPDVKALQEQNAVLHRVCRALIAELADVQR 579
            REDAAR   A E    A      D   ++KA++ QN  L  +C    A LAD+++
Sbjct: 2855 REDAARGVAAIEDNAAALESELLDVLAELKAMKGQNDALKALCEMKDAALADLEK 2909



 Score = 35.9 bits (79), Expect = 0.73
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +1

Query: 415  REDAARSQGAFEVYRRASREPSADTEPDVKALQEQNAVLHRVCRALIAELADVQR 579
            REDAAR   A E    A      D   ++KA++ QN  L  +C    A LAD+++
Sbjct: 3453 REDAARGVAAIEDNAAALESELLDVLAELKAMKGQNDALKALCEMKDAALADLEK 3507


>UniRef50_Q5TQG3 Cluster: ENSANGP00000027134; n=2; Culicidae|Rep:
           ENSANGP00000027134 - Anopheles gambiae str. PEST
          Length = 877

 Score = 35.5 bits (78), Expect = 0.97
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 400 GFGYNREDAARSQGAFEVYRRASREPSADTEPDV-KALQEQNAVLHRVCRALIAELADVQ 576
           G  Y++  +A S    +V  +A+  P     PDV K L+EQN +L R+C  L  EL  +Q
Sbjct: 809 GGDYDKRISALSDSLRQVRFKANDPPPV--MPDVLKQLKEQNLLLLRICNDLSEELLHIQ 866

Query: 577 RDRQ 588
           + R+
Sbjct: 867 QKRE 870


>UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 160

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = -2

Query: 98  PPNRVSNETMKVVVFQRRSRETISHLCYTSHV 3
           P + +S ETM+VVVF RR     SHL YT HV
Sbjct: 97  PLHWISKETMEVVVFHRRRS---SHLFYTLHV 125


>UniRef50_A6G9K2 Cluster: Sporulation protein, amidase enhancer;
           n=1; Plesiocystis pacifica SIR-1|Rep: Sporulation
           protein, amidase enhancer - Plesiocystis pacifica SIR-1
          Length = 559

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = -1

Query: 588 LAVPLHVRQLGNERATHAVQHGVLLLQRLHIWLRVRRGL 472
           + V LH R     RATHA  HGV     LH  LR+RR L
Sbjct: 457 VGVELHARGRSG-RATHATLHGVRRSVELHGELRIRRAL 494


>UniRef50_UPI0000EB01D5 Cluster: UPI0000EB01D5 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB01D5 UniRef100
           entry - Canis familiaris
          Length = 415

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 233 EAGPSSAATIGSRVGGGGRAPVTSPLCTLGTKHRAPADIIDRAP-LPPNRVS 81
           +A P + A   S    GG  PV+S  C  GT+HR+P     R P  P NR+S
Sbjct: 363 QAPPRAGAPAVSHPAPGGLRPVSS--CPAGTQHRSPWAPGPRQPCCPQNRLS 412


>UniRef50_Q0DBX3 Cluster: Os06g0517400 protein; n=8; Oryza sativa
           (japonica cultivar-group)|Rep: Os06g0517400 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 375

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -2

Query: 242 GCNEAGPSSAATIGSRVGGGGRAPVTSPLCTLGTKHRAPAD 120
           G   A P  AAT     GGG  AP+ SP   +GT  R P +
Sbjct: 129 GSRGARPK-AATAARPAGGGAPAPLWSPAAAIGTAERRPRE 168


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,872,207
Number of Sequences: 1657284
Number of extensions: 7920365
Number of successful extensions: 31837
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31811
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)