Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0289
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   5.7  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   5.7  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   7.5  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   7.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   10.0 

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +1

Query: 406 GYNREDAARSQGAFEVYRRASREPSADTEPDV-KALQEQNAVLHR 537
           G +R    R     E     SR P  D EP V K+L E  + + R
Sbjct: 353 GRSRSQTKRYSQTVESTNAPSRSPGPDEEPSVYKSLAEAASKMAR 397


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 531 QHGVLLLQRLHIWLRVRRGLTRGTPVNLEGT 439
           +HG++    +H+ ++ R+G  R  P   E T
Sbjct: 266 EHGIVRPDLIHLLIQARKGQLRYQPQESEET 296


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +1

Query: 424 AARSQGAFEVYRRASREPSADTEPDVKALQEQNAVLHRVCRALIA 558
           +A   G+F VY R          P++ +  EQ+ +    CR L +
Sbjct: 221 SALLNGSFRVYHRCFGRGEGLFLPELYSYDEQSCIECAECRGLFS 265


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 30  DRFARSSLKNHYFHCFITYSVGRKRC 107
           DRFA ++    + H F+ +  G + C
Sbjct: 425 DRFALAATHARHTHAFLPFGDGPRNC 450


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 45  SSLKNHYFHCFITYSVGRK 101
           SS    +FHC+     GRK
Sbjct: 403 SSFFQQFFHCYCPVKFGRK 421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,784
Number of Sequences: 2352
Number of extensions: 7735
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)