Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0289
(600 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ884938-1|ABI78986.1| 410|Homo sapiens basonuclin 2 protein. 31 3.1
AK090911-1|BAC03545.1| 134|Homo sapiens protein ( Homo sapiens ... 31 4.1
DQ884944-1|ABI78991.1| 245|Homo sapiens basonuclin 2 protein. 30 5.4
DQ884940-1|ABI78988.1| 295|Homo sapiens basonuclin 2 protein. 30 5.4
DQ884939-1|ABI78987.1| 387|Homo sapiens basonuclin 2 protein. 30 5.4
AY438376-1|AAR99389.1| 1021|Homo sapiens basonuclin2 protein. 30 5.4
AL450105-2|CAM21221.1| 1099|Homo sapiens basonuclin 2 protein. 30 5.4
AK131398-1|BAD18545.1| 1099|Homo sapiens protein ( Homo sapiens ... 30 5.4
AK000021-1|BAA90889.1| 223|Homo sapiens protein ( Homo sapiens ... 30 5.4
BC070272-1|AAH70272.1| 223|Homo sapiens chromosome 17 open read... 30 7.1
BC018880-1|AAH18880.1| 223|Homo sapiens chromosome 17 open read... 30 7.1
BC009261-1|AAH09261.1| 223|Homo sapiens chromosome 17 open read... 30 7.1
AK222506-1|BAD96226.1| 223|Homo sapiens hypothetical protein FL... 30 7.1
>DQ884938-1|ABI78986.1| 410|Homo sapiens basonuclin 2 protein.
Length = 410
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -2
Query: 581 SLCTSASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAASSRLY 408
S CT AM ++ RC+ C+C F G ++ + + D+ ++ LY
Sbjct: 135 SHCTRLKVAMISKAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHLY 192
>AK090911-1|BAC03545.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ33592 fis, clone BRAMY2012691. ).
Length = 134
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 566 ASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAA 423
++S+ RH+R ST+ CS GSVS+ R R +S+ C A+
Sbjct: 44 STSSSCTRHSRLSTSRCSSEPMRRGSVSSR--RRPRARSSRQRCSSAS 89
>DQ884944-1|ABI78991.1| 245|Homo sapiens basonuclin 2 protein.
Length = 245
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = -2
Query: 590 SWRSLCTSASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAASSRL 411
+W++ T+ MS + RC+ C+C F G ++ + + D+ ++ L
Sbjct: 17 TWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHL 76
Query: 410 Y 408
Y
Sbjct: 77 Y 77
>DQ884940-1|ABI78988.1| 295|Homo sapiens basonuclin 2 protein.
Length = 295
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = -2
Query: 590 SWRSLCTSASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAASSRL 411
+W++ T+ MS + RC+ C+C F G ++ + + D+ ++ L
Sbjct: 17 TWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHL 76
Query: 410 Y 408
Y
Sbjct: 77 Y 77
>DQ884939-1|ABI78987.1| 387|Homo sapiens basonuclin 2 protein.
Length = 387
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = -2
Query: 590 SWRSLCTSASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAASSRL 411
+W++ T+ MS + RC+ C+C F G ++ + + D+ ++ L
Sbjct: 109 TWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHL 168
Query: 410 Y 408
Y
Sbjct: 169 Y 169
>AY438376-1|AAR99389.1| 1021|Homo sapiens basonuclin2 protein.
Length = 1021
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = -2
Query: 590 SWRSLCTSASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAASSRL 411
+W++ T+ MS + RC+ C+C F G ++ + + D+ ++ L
Sbjct: 17 TWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHL 76
Query: 410 Y 408
Y
Sbjct: 77 Y 77
>AL450105-2|CAM21221.1| 1099|Homo sapiens basonuclin 2 protein.
Length = 1099
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = -2
Query: 590 SWRSLCTSASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAASSRL 411
+W++ T+ MS + RC+ C+C F G ++ + + D+ ++ L
Sbjct: 95 TWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHL 154
Query: 410 Y 408
Y
Sbjct: 155 Y 155
>AK131398-1|BAD18545.1| 1099|Homo sapiens protein ( Homo sapiens
cDNA FLJ16490 fis, clone CTONG2020411, weakly similar
to BASONUCLIN. ).
Length = 1099
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = -2
Query: 590 SWRSLCTSASSAMSARHTRCSTAFCSCSAFTSGSVSAEGSREARR*TSKAPCDRAASSRL 411
+W++ T+ MS + RC+ C+C F G ++ + + D+ ++ L
Sbjct: 95 TWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHL 154
Query: 410 Y 408
Y
Sbjct: 155 Y 155
>AK000021-1|BAA90889.1| 223|Homo sapiens protein ( Homo sapiens
cDNA FLJ20014 fis, clone ADSE00113. ).
Length = 223
Score = 30.3 bits (65), Expect = 5.4
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 239 CNEAGPSSAATIGSRVGGGGRAPVTSPLCTLGTKHR 132
C AG S +A G+ GGG RA ++SPL GT R
Sbjct: 42 CGGAGSSGSAESGA--GGGRRATISSPLKLEGTVSR 75
>BC070272-1|AAH70272.1| 223|Homo sapiens chromosome 17 open reading
frame 59 protein.
Length = 223
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 239 CNEAGPSSAATIGSRVGGGGRAPVTSPLCTLGTKHR 132
C AG S +A G+ GGG RA ++SPL GT R
Sbjct: 42 CGGAGSSGSAESGA--GGGRRATISSPLELEGTVSR 75
>BC018880-1|AAH18880.1| 223|Homo sapiens chromosome 17 open reading
frame 59 protein.
Length = 223
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 239 CNEAGPSSAATIGSRVGGGGRAPVTSPLCTLGTKHR 132
C AG S +A G+ GGG RA ++SPL GT R
Sbjct: 42 CGGAGSSGSAESGA--GGGRRATISSPLELEGTVSR 75
>BC009261-1|AAH09261.1| 223|Homo sapiens chromosome 17 open reading
frame 59 protein.
Length = 223
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 239 CNEAGPSSAATIGSRVGGGGRAPVTSPLCTLGTKHR 132
C AG S +A G+ GGG RA ++SPL GT R
Sbjct: 42 CGGAGSSGSAESGA--GGGRRATISSPLELEGTVSR 75
>AK222506-1|BAD96226.1| 223|Homo sapiens hypothetical protein
FLJ20014 variant protein.
Length = 223
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 239 CNEAGPSSAATIGSRVGGGGRAPVTSPLCTLGTKHR 132
C AG S +A G+ GGG RA ++SPL GT R
Sbjct: 42 CGGAGSSGSAESGA--GGGRRATISSPLELEGTVSR 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,664,927
Number of Sequences: 237096
Number of extensions: 1242452
Number of successful extensions: 4423
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4423
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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