Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0190
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282...    37   0.015
05_03_0425 - 13808840-13809414,13809552-13809765,13810268-138113...    34   0.11 
12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53...    33   0.19 
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45...    33   0.19 
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744...    33   0.19 
02_05_0125 + 26046448-26046654,26046754-26047149,26047557-26047763     29   4.0  

>05_01_0361 -
           2824728-2826043,2826288-2826507,2827616-2827702,
           2827726-2827980,2828704-2828733
          Length = 635

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = +1

Query: 97  KSFLYTWCAKKGLT-PLFDIRATGPKHRQRFLCEVRVEGFSYLGAGNSTTKKDAQMNAAK 273
           K+ L     + GL  P++    +GP H   F C V + G ++ G     TKK AQ NAA 
Sbjct: 131 KNLLQETAHRAGLKLPVYTTIRSGPGHTPVFTCTVELAGMTFTG-NPGKTKKQAQKNAAM 189

Query: 274 ---DFVSYLVRAGQIPQADVPED 333
                +  L R G+   +  P D
Sbjct: 190 AAWSELKQLPRVGEPSSSSCPPD 212


>05_03_0425 -
           13808840-13809414,13809552-13809765,13810268-13811317,
           13811616-13811687,13812075-13812334,13812647-13812731
          Length = 751

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 184 FLCEVRVEGFSYLGAGNSTTKKDAQMNAAK 273
           FLC V + G  Y+GA  + TKKDA++ AA+
Sbjct: 525 FLCTVEIGGIQYIGAA-ARTKKDAEIKAAR 553


>12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-538255,
            538601-538860,539950-540073,540978-541310,541447-541531,
            541683-541768,541843-541941,542041-542180,542717-543043,
            543163-543774,543887-543971,543972-544067,544147-544500,
            544536-544559,544597-544707,544811-544894,545468-545546,
            546122-546279,546412-546528,546622-546780,546857-546939,
            547525-547627,549184-549495
          Length = 1925

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +1

Query: 184  FLCEVRVEGFSYLGAGNSTTKKDAQMNAAK 273
            F+C V + G  Y+GA  + TKKDA++ AA+
Sbjct: 1650 FICTVEIGGIQYIGAA-ARTKKDAEIKAAR 1678


>11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-459581,
            459924-460183,461834-461918,462587-462919,463053-463137,
            463289-463374,463455-463556,463656-463795,464332-464658,
            464778-465389,465502-465586,465587-465682,465762-466115,
            466212-466322,466426-466509,467086-467164,467742-467899,
            468034-468150,468240-468398,468475-468557,469098-469200,
            470784-471080
          Length = 1899

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +1

Query: 184  FLCEVRVEGFSYLGAGNSTTKKDAQMNAAK 273
            F+C V + G  Y+GA  + TKKDA++ AA+
Sbjct: 1575 FICTVEIGGIQYIGAA-ARTKKDAEIKAAR 1603


>01_06_0866 -
           32572002-32572541,32572806-32572984,32574330-32574430,
           32574554-32574887,32574915-32575037,32575193-32575394,
           32575915-32576097,32576332-32576436,32576553-32576760,
           32577025-32577170,32577321-32577443,32577490-32577698,
           32577931-32578152,32578189-32578198,32578710-32578763,
           32580841-32581052,32581620-32581772,32582071-32582158,
           32582192-32582290,32582660-32582907,32584806-32585049
          Length = 1260

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 97  KSFLYTWCAKKG-LTPLFDIRATGPKHRQRFLCEVRVEGFSYLGAGNSTTKKDAQMNAAK 273
           KS L  +  KKG L P +     GP H  RF   V V+G ++       T K+A+  AAK
Sbjct: 88  KSQLQIYAQKKGKLLPSYQTIREGPGHASRFKSVVTVDGKAFESPEYFHTVKEAESAAAK 147


>02_05_0125 + 26046448-26046654,26046754-26047149,26047557-26047763
          Length = 269

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 383 FSTDSSLVDSSIAFAFTSSGTSACGICPALTR 288
           F  D +  +++ A A TSSG SA G C  +TR
Sbjct: 174 FLVDDATAEAAAAAAATSSGISANGPCQGVTR 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,407,727
Number of Sequences: 37544
Number of extensions: 274927
Number of successful extensions: 537
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)