Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0187
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 38 0.011
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 38 0.011
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 38 0.019
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 34 0.17
BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p pro... 31 2.1
BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p pro... 31 2.1
AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA... 31 2.1
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 30 3.7
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 30 3.7
AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA ... 30 3.7
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 627 ALXAQRXVVKXEHGKRVRKIRNSVHFRRPKTFE 725
A Q+ ++K G R RKIR +VHFRRP T +
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLK 166
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 627 ALXAQRXVVKXEHGKRVRKIRNSVHFRRPKTFE 725
A Q+ ++K G R RKIR +VHFRRP T +
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLK 174
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 37.5 bits (83), Expect = 0.019
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 627 ALXAQRXVVKXEHGKRVRKIRNSVHFRRPKTFE 725
A Q+ ++K G R RKIR +VHFRRP T +
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLK 174
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 34.3 bits (75), Expect = 0.17
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 627 ALXAQRXVVKXEHGKRVRKIRNSVHFRRPKTFE 725
A Q+ ++K G R RKIR +VHFRRP T +
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLK 166
>BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p
protein.
Length = 481
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 145 QNTGTCPESSCACPEISCACPETSCACPESS 237
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
>BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p
protein.
Length = 481
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 145 QNTGTCPESSCACPEISCACPETSCACPESS 237
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
>AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA
protein.
Length = 481
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + T + PE S + PE S + PE + + PE S
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEES 189
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + + + PE S + PE + + PE S + PE S
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEES 196
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 145 QNTGTCPESSCACPEISCACPETSCACPESS 237
+ T + PE S + PE S + PE + + PE S
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEES 210
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 665 MFTFYNXPLSXKCFSNRFHYFFLSLNPSLFG 573
M+ Y+ P K +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 665 MFTFYNXPLSXKCFSNRFHYFFLSLNPSLFG 573
M+ Y+ P K +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA
protein.
Length = 1127
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 133 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 237
TC ++++ T + + ++ CAC SC ESS
Sbjct: 247 TCSTRSSSTTSTNEASASDVKCACDAPSCRFMESS 281
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,116
Number of Sequences: 53049
Number of extensions: 209899
Number of successful extensions: 800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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