Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0185
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0382 - 7958634-7959272,7959358-7959583,7959725-7959810,795... 62 3e-10
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617... 62 4e-10
01_06_1148 - 34895562-34895690,34896339-34896464,34896579-348969... 62 6e-10
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 61 8e-10
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 59 3e-09
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 59 4e-09
06_03_1177 + 28174909-28175016,28176386-28176484,28177188-281772... 54 1e-07
07_03_0036 + 12694304-12694408,12694551-12694652,12694867-126949... 33 0.040
12_02_0870 - 23852923-23853228,23853416-23853728,23853813-238539... 31 0.71
10_08_0529 - 18565749-18565804,18566022-18566128,18566206-185664... 29 3.8
07_03_0931 - 22720388-22720393,22720586-22720649,22720770-22721356 29 3.8
03_06_0619 - 35136435-35136728,35137155-35137358,35137476-351376... 29 3.8
11_05_0079 + 18914668-18914753,18915123-18915338,18915829-189158... 29 5.0
06_01_0033 - 346273-347355 29 5.0
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 6.6
08_02_1262 - 25692905-25693220,25693480-25693750,25693817-25694381 28 8.7
>03_02_0382 -
7958634-7959272,7959358-7959583,7959725-7959810,
7959909-7959989,7960102-7960200,7960348-7960466,
7960557-7960677,7960831-7960881,7961041-7961142,
7962610-7962717,7962877-7962962,7963353-7963449
Length = 604
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +3
Query: 462 AKVAALSS--EKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYAKTLLXDLI 635
A V AL+S +DV ++LP WV FP+ E+ +WLN+ L ++WP V A ++ D +
Sbjct: 99 ADVNALASLDREDVKKICGENLPEWVSFPEYEQVKWLNKQLSKLWPFVEEAATMVIRDSV 158
Query: 636 EPAVAXSLANYKLSGFKFERMILGTIAPRV 725
EP + +S KF ++ LGT+ P++
Sbjct: 159 EP-ILDDYRPAGISSLKFSKLSLGTVPPKI 187
>04_04_1357 +
32860677-32860781,32861484-32861588,32861678-32861728,
32861829-32861949,32862495-32862616,32863032-32863133,
32863226-32863300,32863391-32863470,32863601-32863751,
32863850-32864080,32864221-32864517,32864638-32864751,
32864857-32865030
Length = 575
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/96 (32%), Positives = 51/96 (53%)
Frame = +3
Query: 435 KENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYAK 614
+ + IA + ++ E L D PSWV F ++ +WLN+ L+++WP VN+ A
Sbjct: 31 RRRQLAATIASFSKMTIEDSRKLLPADLYPSWVVFSTQQKLKWLNQELIKIWPFVNAAAS 90
Query: 615 TLLXDLIEPAVAXSLANYKLSGFKFERMILGTIAPR 722
L+ +EP V L+ KF ++ LGT+AP+
Sbjct: 91 ELIKTSVEP-VLEQYRPIILASLKFSKLTLGTVAPQ 125
>01_06_1148 -
34895562-34895690,34896339-34896464,34896579-34896906,
34897127-34897216,34897284-34897360,34897519-34897593,
34897862-34897980,34899240-34899363,34899427-34899477,
34899590-34899688,34900104-34900214
Length = 442
Score = 61.7 bits (143), Expect = 6e-10
Identities = 27/89 (30%), Positives = 46/89 (51%)
Frame = +3
Query: 453 RNIAKVAALSSEKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYAKTLLXDL 632
+N+ + + D + L ++P W+ PD +R +WLNR L +WP +N + D+
Sbjct: 37 KNVKVRPLVEYDSDSLDDTLPEIPLWLKNPDYDRLDWLNRFLELMWPYLNKAICRIAQDV 96
Query: 633 IEPAVAXSLANYKLSGFKFERMILGTIAP 719
P +A + YK+ KFE LG++ P
Sbjct: 97 ANPIIAKNKEKYKIDYIKFETFTLGSLPP 125
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 61.3 bits (142), Expect = 8e-10
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +3
Query: 510 LDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYAKTLLXDLIEPAVAXSLANYKLSGFKF 689
L ++P WV PD +R +WLNR L +WP +N D+ +P + + YKL +F
Sbjct: 56 LPEIPLWVKNPDYDRIDWLNRFLEMMWPYLNKAICRTALDIAKPIIEENRKTYKLESIEF 115
Query: 690 ERMILGTIAP 719
E + LG++ P
Sbjct: 116 ESLTLGSLPP 125
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 59.3 bits (137), Expect = 3e-09
Identities = 22/70 (31%), Positives = 41/70 (58%)
Frame = +3
Query: 510 LDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYAKTLLXDLIEPAVAXSLANYKLSGFKF 689
L ++P WV PD +R +WLN+ + +WP ++ ++ +P +A + A YK+ +F
Sbjct: 56 LPEVPHWVKNPDFDRIDWLNKFVENIWPYLDKAICKTAKEIAKPIIAENTAKYKIDSVEF 115
Query: 690 ERMILGTIAP 719
E + LG++ P
Sbjct: 116 ETLTLGSLPP 125
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +3
Query: 510 LDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYAKTLLXDLIEPAVAXSLANYKLSGFKF 689
L ++P WV PD +R +W++R L +WP +N D+ P +A + YK+ +F
Sbjct: 56 LHEIPLWVKNPDCDRIDWVSRFLEMMWPYLNKAICKTAQDIANPIIAENKEKYKIDSIEF 115
Query: 690 ERMILGTIAP 719
E + LG++ P
Sbjct: 116 ETLTLGSLPP 125
>06_03_1177 +
28174909-28175016,28176386-28176484,28177188-28177238,
28177394-28177517,28177765-28177883,28177954-28178055,
28178124-28178198,28178390-28178466,28178920-28179169,
28179311-28179664,28179807-28179941,28180097-28180225
Length = 540
Score = 54.0 bits (124), Expect = 1e-07
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 486 EKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYAKTLLXDLIEPAVAXSLAN 665
+ + + + D+P WV PD ER +W+N+ + +WP ++ + +I P +
Sbjct: 47 DSETLQTTIPDIPLWVKCPDYERVDWINKFIFDMWPFLDKAICNTIRSVIRPTFDQYVGQ 106
Query: 666 YKLSGFKFERMILGTIAP 719
Y + +F + LG + P
Sbjct: 107 YGIKSIEFGHLTLGALPP 124
>07_03_0036 +
12694304-12694408,12694551-12694652,12694867-12694947,
12696475-12696525,12697308-12697473,12698759-12698877,
12698975-12699073,12699684-12699764,12699845-12699927,
12701177-12701402,12704272-12704439,12706408-12706800
Length = 557
Score = 32.7 bits (71), Expect(2) = 0.040
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 14/78 (17%)
Frame = +3
Query: 534 FFPDVERAEWLNRILLQVWPNVNSY-----AKTLLXD------LIEPAVAXSLANYK--- 671
FF D+E +WLN+ L ++WP V+ A LL +++ +V L +Y+
Sbjct: 91 FFGDIE-VKWLNKHLSKLWPFVDQILVLLGATKLLVPFQAATAVVKESVEPLLDDYRPPG 149
Query: 672 LSGFKFERMILGTIAPRV 725
+ KF + LGT++P++
Sbjct: 150 IKSLKFSKFSLGTVSPKI 167
Score = 21.8 bits (44), Expect(2) = 0.040
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +3
Query: 513 DDLPSWVFFPDVER 554
D+ P W+ FP E+
Sbjct: 56 DNFPEWISFPQYEQ 69
>12_02_0870 -
23852923-23853228,23853416-23853728,23853813-23853938,
23854038-23854243,23854311-23854443,23854607-23854688,
23854785-23854914,23855034-23855126,23855211-23855333,
23855786-23855977,23858230-23858394,23858697-23858768,
23858826-23858945,23859873-23859949,23860032-23860398,
23860738-23861871
Length = 1212
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -2
Query: 576 VSCSTIRLVRRPGRIPMKASRQVSLVSHLFQKTV---QRPLRCCVCIRS 439
+S S ++ +R R K +V SH+++K + + L+CCVC++S
Sbjct: 48 ISLSLMKAIRARARKYKKLKDKVPASSHIWRKELGSRSKGLKCCVCLKS 96
>10_08_0529 -
18565749-18565804,18566022-18566128,18566206-18566410,
18566500-18566812
Length = 226
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 633 IEPAVAXSLANYKLSGFKFERMILGTIAPR 722
++PA A ++A Y+ +GF+ + ++G APR
Sbjct: 138 VDPARAAAVALYRKAGFQVDATVVGYYAPR 167
>07_03_0931 - 22720388-22720393,22720586-22720649,22720770-22721356
Length = 218
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 308 YDVHISQKGVDCRSCVLSRLYAMERCVAYWARYIVGDARSMAQGERI 448
YDV I+ +GVD + V +RL+ +R VA R + D +SM G+R+
Sbjct: 59 YDVFINHRGVDTKRTV-ARLF-YDRLVAAGVRAFL-DNQSMRPGDRL 102
>03_06_0619 -
35136435-35136728,35137155-35137358,35137476-35137646,
35137902-35138050,35138380-35138527,35138614-35138682,
35138767-35139027,35139223-35139417,35139772-35139888,
35140026-35140961
Length = 847
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 405 ILSVMRDQWRKENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFPDVERA 557
IL+ +WRK ++K N+ KVA+ + + + R+ SW+ P + A
Sbjct: 441 ILTNFEQRWRKATKWKVNLKKVASWHHDTLIKINRM----SWIVTPAADEA 487
>11_05_0079 +
18914668-18914753,18915123-18915338,18915829-18915895,
18916656-18916723,18916999-18917125,18918240-18918339,
18918405-18918433,18918678-18918730,18919246-18919732
Length = 410
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 429 WRKENEYKRNIAKVAALSSEKDVILARLDDLPSWV 533
W K N+Y + K K V+LAR LPS++
Sbjct: 261 WLKSNKYFHIVVKGVERDGWKFVLLARFSPLPSYI 295
>06_01_0033 - 346273-347355
Length = 360
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +3
Query: 336 SIVGAVY----LVGYMQWSVAWLIGPVILSVMRDQWR 434
++VG+ Y L GY W++ + + + S++RDQ R
Sbjct: 257 AVVGSAYEVIKLKGYTSWAIGYSVASIAWSLLRDQRR 293
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 405 ILSVMRDQWRKENEYKRNIAKVAALSSEKDVILARLDDLPSW 530
ILS+ D W + N AK+ + S + DV+ D PSW
Sbjct: 809 ILSLEFDPWDESYSTANNFAKMLSASEKNDVLF----DAPSW 846
>08_02_1262 - 25692905-25693220,25693480-25693750,25693817-25694381
Length = 383
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 296 VAIITAWW*GSFACTCHVIITGHAA 222
+A++ WW S A +C I+ H A
Sbjct: 17 LALVAQWWSSSMAASCSFTISNHCA 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,742,884
Number of Sequences: 37544
Number of extensions: 375397
Number of successful extensions: 1011
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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