Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0185
(730 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 26 1.0
EF588628-1|ABQ96818.1| 176|Anopheles gambiae transposase protein. 25 3.2
EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519517-1|ABP73580.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519516-1|ABP73579.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519515-1|ABP73578.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519514-1|ABP73577.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519511-1|ABP73574.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519510-1|ABP73573.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein. 24 5.5
EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein. 24 5.5
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 5.5
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 24 5.5
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 23 7.3
EF519528-1|ABP73591.1| 250|Anopheles gambiae APL2 protein. 23 9.7
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 26.2 bits (55), Expect = 1.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 255 ASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGY 368
A + +P GS G +++++MY + +V++V ++GY
Sbjct: 600 AVTSGVPQGSVLGPTLWNLMYDGVLRVAMVEGARIIGY 637
>EF588628-1|ABQ96818.1| 176|Anopheles gambiae transposase protein.
Length = 176
Score = 24.6 bits (51), Expect = 3.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 379 LHCI*PTKYTAPTIDTFLRNVYIIEKTL 296
L+C+ KYT TI R++ ++ KT+
Sbjct: 25 LYCLKVFKYTKGTISNLKRHLNLVHKTV 52
>EF519524-1|ABP73587.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519520-1|ABP73583.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519517-1|ABP73580.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519516-1|ABP73579.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519515-1|ABP73578.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519514-1|ABP73577.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519513-1|ABP73576.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519512-1|ABP73575.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519511-1|ABP73574.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519510-1|ABP73573.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519509-1|ABP73572.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>EF519507-1|ABP73570.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI+H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPITH 250
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.8 bits (49), Expect = 5.5
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 598 TFGQTCRSILFNHSARSTSGKN-THEGKSS 512
T GQ RS NH +SGK+ T G SS
Sbjct: 1247 TLGQYIRSACSNHYGDHSSGKDPTGAGSSS 1276
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.8 bits (49), Expect = 5.5
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Frame = +3
Query: 234 SDNNMAGASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVI-- 407
++ N +P GS G +++++MY + +++ L+G+ V +G I
Sbjct: 598 NEGNRERVVTAGVPQGSVLGPTLWNLMYNEVLGLTLYDGASLIGFADDIVLVAVGSRIDD 657
Query: 408 --------LSVMRDQWRKENEYKRNIAK 467
++++R QW + E + NI+K
Sbjct: 658 LENTIETSINIIR-QWMESVELQLNISK 684
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 583 CRSILFNHSARSTSGKNTHEGKSSSLASITSFSEDSAAT 467
C S + + S ST + H+ SSS +S +S S S+++
Sbjct: 88 CHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSS 126
>EF519528-1|ABP73591.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.0 bits (47), Expect = 9.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 511 SLASITSFSEDSAATFAMLRLYSFSLRH*SRITDNITGPISH 386
S I F SAA F L L +++++T PI H
Sbjct: 209 SFNRIREFDFRSAARFGKLVLLKLDGNQLESVSNSLTAPIXH 250
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,792
Number of Sequences: 2352
Number of extensions: 16018
Number of successful extensions: 313
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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