Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0184
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   6.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   6.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   6.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 146 WASLTSSYRAW*PFSLWFCN 87
           WA+ T+S R W  F    CN
Sbjct: 525 WANCTASTRCWEVFMDGICN 544


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 598 PPICSRLYYCEHRSFSL 548
           P IC + YYC    +++
Sbjct: 119 PHICDKFYYCVDGKYNM 135


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +1

Query: 115 QARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQ 228
           + RY+ + E  + L  E + +  E    + NVK++S++
Sbjct: 206 RVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKE 243


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +1

Query: 115 QARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQ 228
           + RY+ + E  + L  E + +  E    + NVK++S++
Sbjct: 206 RVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKE 243


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/39 (15%), Positives = 23/39 (58%)
 Frame = +1

Query: 112 YQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQ 228
           Y+A+  ++++ + +   +++ +  EF   +MN+ ++  +
Sbjct: 147 YRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSR 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,891
Number of Sequences: 336
Number of extensions: 2092
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)