Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0184
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein. 39 0.018
AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily mot... 39 0.024
AL357752-3|CAI41487.1| 1232|Homo sapiens kinesin family member 4... 38 0.056
AL139398-5|CAI41024.1| 1232|Homo sapiens kinesin family member 4... 38 0.056
AJ271784-1|CAB75427.1| 1232|Homo sapiens chromokinesin protein. 38 0.056
AF277375-1|AAF86334.1| 1103|Homo sapiens chromokinesin protein. 38 0.056
AF179308-1|AAD51855.1| 1232|Homo sapiens KIF4 protein. 38 0.056
AB208797-1|BAD92034.1| 1235|Homo sapiens Chromosome-associated k... 38 0.056
AL832639-1|CAD89954.1| 1331|Homo sapiens hypothetical protein pr... 31 4.8
AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2 pro... 31 4.8
Z82215-4|CAB05105.1| 1960|Homo sapiens myosin, heavy chain 9, no... 30 8.5
M31013-1|AAA36349.1| 1247|Homo sapiens protein ( Human nonmuscle... 30 8.5
CR456526-1|CAG30412.1| 1960|Homo sapiens MYH9 protein. 30 8.5
AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein. 30 8.5
AB191263-1|BAD52439.1| 1960|Homo sapiens non-muscle myosin heavy... 30 8.5
>DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein.
Length = 1185
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRRAAPASDSDDKENNPSSTEISLD 433
+G C K CGC K + C C C CRNR+ S ++ S L+
Sbjct: 1091 KGWCGNKQCGCRKQKSDCGVDCSCDPTKCRNRQQGKDSLGTVEQTQDSEGSFKLE 1145
>AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily motor
KIF4 protein.
Length = 1232
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRRAAPASDSDDKENNPSSTEISLD 433
+G C K CGC K + C C C CRNR+ S + S + L+
Sbjct: 1089 KGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQQGKDSLGTVERTQDSESSFKLE 1143
>AL357752-3|CAI41487.1| 1232|Homo sapiens kinesin family member 4A
protein.
Length = 1232
Score = 37.5 bits (83), Expect = 0.056
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRR 367
+G C K CGC K + C C C CRNR+
Sbjct: 1089 KGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQ 1121
>AL139398-5|CAI41024.1| 1232|Homo sapiens kinesin family member 4A
protein.
Length = 1232
Score = 37.5 bits (83), Expect = 0.056
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRR 367
+G C K CGC K + C C C CRNR+
Sbjct: 1089 KGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQ 1121
>AJ271784-1|CAB75427.1| 1232|Homo sapiens chromokinesin protein.
Length = 1232
Score = 37.5 bits (83), Expect = 0.056
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRR 367
+G C K CGC K + C C C CRNR+
Sbjct: 1089 KGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQ 1121
>AF277375-1|AAF86334.1| 1103|Homo sapiens chromokinesin protein.
Length = 1103
Score = 37.5 bits (83), Expect = 0.056
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRR 367
+G C K CGC K + C C C CRNR+
Sbjct: 960 KGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQ 992
>AF179308-1|AAD51855.1| 1232|Homo sapiens KIF4 protein.
Length = 1232
Score = 37.5 bits (83), Expect = 0.056
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRR 367
+G C K CGC K + C C C CRNR+
Sbjct: 1089 KGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQ 1121
>AB208797-1|BAD92034.1| 1235|Homo sapiens Chromosome-associated
kinesin KIF4A variant protein.
Length = 1235
Score = 37.5 bits (83), Expect = 0.056
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 269 RGSCATKMCGCVKSERACRPACRCQHALCRNRR 367
+G C K CGC K + C C C CRNR+
Sbjct: 1092 KGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQ 1124
>AL832639-1|CAD89954.1| 1331|Homo sapiens hypothetical protein
protein.
Length = 1331
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 85 ELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQK 231
E++ Q E+ + + ++A RL V KA+FER L +QSE+K
Sbjct: 958 EMKTQLEE-LEGELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEK 1005
>AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2
protein.
Length = 467
Score = 31.1 bits (67), Expect = 4.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 161 SSSTIARRNSKGS**MSRNRANKS*RRYWRCSAARQRGSCATKMCGC 301
+++T+A R + S A+ S RR WRC+ +R+R C C
Sbjct: 10 TNATVAGRTACAPSARSSRSASVSWRRRWRCAGSRRRRRTRRASCSC 56
>Z82215-4|CAB05105.1| 1960|Homo sapiens myosin, heavy chain 9,
non-muscle protein.
Length = 1960
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 85 ELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQK 231
E++ Q E+ + + ++A RL V KA+FER L +QSE+K
Sbjct: 1536 EMKTQLEE-LEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEK 1583
>M31013-1|AAA36349.1| 1247|Homo sapiens protein ( Human nonmuscle
myosin heavy chain (NMHC) mRNA, 3' end. ).
Length = 1247
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 85 ELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQK 231
E++ Q E+ + + ++A RL V KA+FER L +QSE+K
Sbjct: 823 EMKTQLEE-LEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEK 870
>CR456526-1|CAG30412.1| 1960|Homo sapiens MYH9 protein.
Length = 1960
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 85 ELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQK 231
E++ Q E+ + + ++A RL V KA+FER L +QSE+K
Sbjct: 1536 EMKTQLEE-LEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEK 1583
>AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein.
Length = 563
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 85 ELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQK 231
E++ Q E+ + + ++A RL V KA+FER L +QSE+K
Sbjct: 139 EMKTQLEE-LEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEK 186
>AB191263-1|BAD52439.1| 1960|Homo sapiens non-muscle myosin heavy
polypeptide 9 protein.
Length = 1960
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 85 ELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQK 231
E++ Q E+ + + ++A RL V KA+FER L +QSE+K
Sbjct: 1536 EMKTQLEE-LEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEK 1583
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,373,353
Number of Sequences: 237096
Number of extensions: 1184408
Number of successful extensions: 4245
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4239
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -