Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0184
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3...    42   0.001
AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown prot...    42   0.001
AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA ...    42   0.001
AE014134-930|AAF52259.1|  243|Drosophila melanogaster CG14016-PA...    31   1.4  
AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA...    30   3.2  
AE014134-137|AAF51470.2|  269|Drosophila melanogaster CG2826-PA ...    30   4.2  
AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-P...    29   5.6  
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC...    29   9.8  

>AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3.9
            protein.
          Length = 1212

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 248  RCSAARQRGSCATKMCGCVKSERACRPACRCQHALCRN--RRAAPASDSDDKENNPSSTE 421
            RC   + R  C TK CGC+    AC   C C+ + CRN       AS   D +     TE
Sbjct: 1074 RCKGCKCRTKCTTKRCGCLSGNNACSETCVCK-SNCRNPLNLKDHASQCGDGDGQKDETE 1132


>AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown protein.
          Length = 1212

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 248  RCSAARQRGSCATKMCGCVKSERACRPACRCQHALCRN--RRAAPASDSDDKENNPSSTE 421
            RC   + R  C TK CGC+    AC   C C+ + CRN       AS   D +     TE
Sbjct: 1074 RCKGCKCRTKCTTKRCGCLSGNNACSETCVCK-SNCRNPLNLKDHASQCGDGDGQKDETE 1132


>AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA
            protein.
          Length = 1212

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 248  RCSAARQRGSCATKMCGCVKSERACRPACRCQHALCRN--RRAAPASDSDDKENNPSSTE 421
            RC   + R  C TK CGC+    AC   C C+ + CRN       AS   D +     TE
Sbjct: 1074 RCKGCKCRTKCTTKRCGCLSGNNACSETCVCK-SNCRNPLNLKDHASQCGDGDGQKDETE 1132


>AE014134-930|AAF52259.1|  243|Drosophila melanogaster CG14016-PA
           protein.
          Length = 243

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +2

Query: 266 QRGSCATKMCGCVKSERACRPACRCQHALCRNRRAAPASDSDDKENNPSSTE 421
           +R  C    C C +S   C   CRC    CRN       D +    N S+ +
Sbjct: 31  KRSQCIKNYCDCYQSMAICTKFCRC--VGCRNTEVRELVDPNSVAKNSSAVK 80


>AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA
           protein.
          Length = 950

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 266 QRGSCATKMCGCVKSERACRPACRCQHALCRNRRAAPASDSD 391
           +R  C    C C +++  C   C+C    CRN    P  D D
Sbjct: 817 KRSGCLKNYCECYEAKIPCSSICKC--VGCRNMEDRPDVDMD 856


>AE014134-137|AAF51470.2|  269|Drosophila melanogaster CG2826-PA
           protein.
          Length = 269

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 37  KSLSNVYSSCWSTPSRELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVK 213
           K +SN + S W++ +    N++ K       + KE +D++ V  DN   EF      +K
Sbjct: 45  KYISNNHKSHWNSANEVQVNETRKQLAKIEGQEKETNDKIKVIHDNVDNEFNALSAKIK 103


>AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-PA
           protein.
          Length = 1088

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +1

Query: 82  RELQNQSEKGYQARYEEVKEAHDRLAVEFDNSKAEFERQLMNVKKQSEQK 231
           REL  + E     + E+++E   R   + +  + EFER+ +  +++++QK
Sbjct: 500 RELIRKWEHERHRQEEQIEEERIRRQKQLEQERLEFERRTLQEREEAQQK 549


>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
            protein.
          Length = 4699

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
 Frame = +2

Query: 299  CVKSE-RACRPACRCQHALCRNRRAAPA-SDSDD 394
            CV  E   CRP       LC N R  P  SDS D
Sbjct: 4534 CVGGECNVCRPGSSINECLCENNRVVPCLSDSAD 4567


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,266,325
Number of Sequences: 53049
Number of extensions: 391095
Number of successful extensions: 1371
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)