Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0182
(800 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q00610 Cluster: Clathrin heavy chain 1; n=54; Eukaryota... 394 e-108
UniRef50_P53675 Cluster: Clathrin heavy chain 2; n=87; Eukaryota... 377 e-103
UniRef50_A6R3L7 Cluster: Clathrin heavy chain; n=1; Ajellomyces ... 272 5e-72
UniRef50_P22137 Cluster: Clathrin heavy chain; n=13; Ascomycota|... 264 2e-69
UniRef50_Q4S928 Cluster: Chromosome undetermined SCAF14702, whol... 260 3e-68
UniRef50_A2EV07 Cluster: Clathrin and VPS domain-containing prot... 235 9e-61
UniRef50_Q38KF8 Cluster: Chc1p; n=3; Oligohymenophorea|Rep: Chc1... 225 1e-57
UniRef50_A0CHK3 Cluster: Chromosome undetermined scaffold_182, w... 177 3e-43
UniRef50_Q5CW85 Cluster: Clathrin heavy chain; n=2; Cryptosporid... 170 3e-41
UniRef50_Q1EQ28 Cluster: Clathrin heavy chain; n=4; cellular org... 170 4e-41
UniRef50_A5JZZ8 Cluster: Clathrin heavy chain, putative; n=2; Pl... 165 2e-39
UniRef50_Q8I5L6 Cluster: Clathrin heavy chain, putative; n=10; E... 161 2e-38
UniRef50_Q4Q1R2 Cluster: Clathrin heavy chain, putative; n=10; E... 160 4e-38
UniRef50_Q7QTC4 Cluster: GLP_9_31364_35911; n=3; Giardia intesti... 104 2e-21
UniRef50_A2GL34 Cluster: Clathrin and VPS domain-containing prot... 100 9e-20
UniRef50_A7AVF3 Cluster: Clathrin heavy chain; n=1; Babesia bovi... 89 1e-16
UniRef50_Q4UBV3 Cluster: Clathrin heavy chain, putative; n=1; Th... 61 3e-08
UniRef50_Q4MZN7 Cluster: Clathrin heavy chain, putative; n=1; Th... 60 6e-08
UniRef50_Q59M81 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_UPI00006CCA37 Cluster: hypothetical protein TTHERM_0028... 35 2.1
UniRef50_Q4TE15 Cluster: Chromosome 7 SCAF5879, whole genome sho... 35 2.1
UniRef50_A0EZ22 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_UPI0000DB7242 Cluster: PREDICTED: similar to CG31160-PA... 34 3.6
UniRef50_A6WES2 Cluster: Histidine kinase HAMP region domain pro... 34 3.6
UniRef50_UPI0000588D00 Cluster: PREDICTED: similar to NACHT doma... 34 4.8
UniRef50_Q8F7D6 Cluster: Putative outermembrane protein; n=4; Le... 34 4.8
UniRef50_Q7QVF8 Cluster: GLP_90_9890_12910; n=1; Giardia lamblia... 34 4.8
UniRef50_Q54I78 Cluster: Valyl tRNA synthetase; n=1; Dictyosteli... 33 6.3
UniRef50_A3MY54 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q7VR84 Cluster: Protein tolB precursor; n=3; Enterobact... 33 8.4
>UniRef50_Q00610 Cluster: Clathrin heavy chain 1; n=54; Eukaryota|Rep:
Clathrin heavy chain 1 - Homo sapiens (Human)
Length = 1675
Score = 394 bits (969), Expect = e-108
Identities = 187/253 (73%), Positives = 216/253 (85%), Gaps = 20/253 (7%)
Frame = +3
Query: 42 SWDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDD 221
+W++LV+YLQMARKKARESY+E+ELI+A A+T RLA+LEEFI+GPN+A IQ++GDRC+D+
Sbjct: 1149 NWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDE 1208
Query: 222 KMYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG--------------------EFRL 341
KMY+AAKLLYNNVSNF RLA TLVHL E+Q AVD EFRL
Sbjct: 1209 KMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRL 1268
Query: 342 SQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYK 521
+QMCGLHIVVHADELE+LINYYQDRG+F+ELI++LEAALGLERAHMGMFTELAILYSK+K
Sbjct: 1269 AQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 1328
Query: 522 PVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWRE 701
P KM EHLELFWSRVNIP VLRAAE AHLW+ELVFLYDKY EYDNA +TMM HPT+AW+E
Sbjct: 1329 PQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKE 1388
Query: 702 GHFKDIITKVANM 740
G FKDIITKVAN+
Sbjct: 1389 GQFKDIITKVANV 1401
Score = 33.9 bits (74), Expect = 4.8
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 742 ELXYKAXQFYLXYKPLLLN 798
EL Y+A QFYL +KPLLLN
Sbjct: 1402 ELYYRAIQFYLEFKPLLLN 1420
>UniRef50_P53675 Cluster: Clathrin heavy chain 2; n=87; Eukaryota|Rep:
Clathrin heavy chain 2 - Homo sapiens (Human)
Length = 1640
Score = 377 bits (927), Expect = e-103
Identities = 180/253 (71%), Positives = 211/253 (83%), Gaps = 20/253 (7%)
Frame = +3
Query: 42 SWDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDD 221
+W+DLV++LQMARKK RESYIE+ELI+A A+T R+++LE+FI+GPN+A IQ++GDRC+++
Sbjct: 1149 NWEDLVKFLQMARKKGRESYIETELIFALAKTSRVSELEDFINGPNNAHIQQVGDRCYEE 1208
Query: 222 KMYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG--------------------EFRL 341
MY AAKLLY+NVSNFARLA TLVHL E+Q AVD EFR
Sbjct: 1209 GMYEAAKLLYSNVSNFARLASTLVHLGEYQAAVDNSRKASSTRTWKEVCFACMDGQEFRF 1268
Query: 342 SQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYK 521
+Q+CGLHIV+HADELE+L+ YYQDRG+F+ELI LLEAALGLERAHMGMFTELAILYSK+K
Sbjct: 1269 AQLCGLHIVIHADELEELMCYYQDRGYFEELILLLEAALGLERAHMGMFTELAILYSKFK 1328
Query: 522 PVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWRE 701
P KM EHLELFWSRVNIP VLRAAE AHLW+ELVFLYDKY EYDNA LTMM HPTEAW+E
Sbjct: 1329 PQKMLEHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVLTMMSHPTEAWKE 1388
Query: 702 GHFKDIITKVANM 740
G FKDIITKVAN+
Sbjct: 1389 GQFKDIITKVANV 1401
Score = 34.7 bits (76), Expect = 2.7
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 742 ELXYKAXQFYLXYKPLLLN 798
EL Y+A QFYL YKPLL+N
Sbjct: 1402 ELCYRALQFYLDYKPLLIN 1420
>UniRef50_A6R3L7 Cluster: Clathrin heavy chain; n=1; Ajellomyces
capsulatus NAm1|Rep: Clathrin heavy chain - Ajellomyces
capsulatus NAm1
Length = 1631
Score = 272 bits (668), Expect = 5e-72
Identities = 129/250 (51%), Positives = 180/250 (72%), Gaps = 20/250 (8%)
Frame = +3
Query: 51 DLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDKMY 230
DLV +L+MARK RES +++ L + YAR +L++LE+F+ G N AD++ GD+ +++ +
Sbjct: 1107 DLVEFLKMARKTLRESAVDTALAFCYARLDQLSELEDFLRGINVADVEASGDKAYEEGFH 1166
Query: 231 NAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG--------------------EFRLSQM 350
AAK+ Y ++SN+A+LA TLVHL+E+Q AV+ EFRL+Q+
Sbjct: 1167 EAAKIFYTSISNWAKLATTLVHLEEYQAAVECARKANNIKVWKQVNEACVSKKEFRLAQI 1226
Query: 351 CGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKPVK 530
CGL+++VHA+EL+DL++ Y+ G+FDELI++LEA LGLERAHMGMFTEL I SKY P K
Sbjct: 1227 CGLNLIVHAEELQDLVHQYERNGYFDELIAVLEAGLGLERAHMGMFTELGISLSKYHPDK 1286
Query: 531 MXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREGHF 710
+ EHL+LFW+R+NIP ++RA E A+LW ELVFLY Y E+DNAAL MM+ ++W F
Sbjct: 1287 VMEHLKLFWTRINIPKMIRACEEANLWPELVFLYCHYDEWDNAALAMMERAADSWEHHSF 1346
Query: 711 KDIITKVANM 740
KDII KVAN+
Sbjct: 1347 KDIIVKVANL 1356
>UniRef50_P22137 Cluster: Clathrin heavy chain; n=13; Ascomycota|Rep:
Clathrin heavy chain - Saccharomyces cerevisiae (Baker's
yeast)
Length = 1653
Score = 264 bits (647), Expect = 2e-69
Identities = 125/252 (49%), Positives = 180/252 (71%), Gaps = 20/252 (7%)
Frame = +3
Query: 45 WDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDK 224
+++L+ +L MARK +E I+ LI AYA ++ ++E ++G N A++ +GD+ F++K
Sbjct: 1156 YEELIPFLLMARKTLKEPKIDGALILAYAELNKIHEIENLLAGSNVANLDHVGDKLFENK 1215
Query: 225 MYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG--------------------EFRLS 344
Y AA+L Y+ VSN+++LA TLV+L ++Q AVD EF+L+
Sbjct: 1216 EYKAARLCYSAVSNYSKLASTLVYLGDYQAAVDTARKASNIKVWKLVNDACIEKKEFKLA 1275
Query: 345 QMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKP 524
Q+CGL+++VHA+EL++L+ Y+ G+F+ELISL EA LGLERAHMGMFTELAILYSKY+P
Sbjct: 1276 QICGLNLIVHAEELDELVERYESNGYFEELISLFEAGLGLERAHMGMFTELAILYSKYEP 1335
Query: 525 VKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREG 704
K EHL+LFWSR+NIP V+RA E AHLWSELVFLY Y E+DNAALT+++ T+
Sbjct: 1336 DKTFEHLKLFWSRINIPKVIRAVEQAHLWSELVFLYAHYDEWDNAALTLIEKSTKDLDHA 1395
Query: 705 HFKDIITKVANM 740
+FK+++ KV+N+
Sbjct: 1396 YFKEVVVKVSNL 1407
>UniRef50_Q4S928 Cluster: Chromosome undetermined SCAF14702, whole
genome shotgun sequence; n=4; Eumetazoa|Rep: Chromosome
undetermined SCAF14702, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1909
Score = 260 bits (637), Expect = 3e-68
Identities = 117/141 (82%), Positives = 129/141 (91%)
Frame = +3
Query: 318 VDAGEFRLSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTEL 497
VD EFRL+QMCGLHIVVHADELE+LINYYQDRG+F+ELI++LEAALGLERAHMGMFTEL
Sbjct: 1452 VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL 1511
Query: 498 AILYSKYKPVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQ 677
AILYSK+KP KM EHLELFWSRVNIP VLRAAE AHLW ELVFLYDKY EYDNA +TMM
Sbjct: 1512 AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMS 1571
Query: 678 HPTEAWREGHFKDIITKVANM 740
HP +AW+EG FKDI+TKVAN+
Sbjct: 1572 HPADAWKEGQFKDIVTKVANV 1592
Score = 33.1 bits (72), Expect = 8.4
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 742 ELXYKAXQFYLXYKPLLLN 798
EL YKA FYL +KPLLLN
Sbjct: 1593 ELYYKAVHFYLEFKPLLLN 1611
>UniRef50_A2EV07 Cluster: Clathrin and VPS domain-containing
protein; n=4; Trichomonas vaginalis G3|Rep: Clathrin and
VPS domain-containing protein - Trichomonas vaginalis G3
Length = 614
Score = 235 bits (575), Expect = 9e-61
Identities = 113/249 (45%), Positives = 169/249 (67%), Gaps = 21/249 (8%)
Frame = +3
Query: 54 LVRYLQMARK-KARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDKMY 230
LV YLQ+AR + + IE+EL++AYA+ L +LEE +S PN A ++I DRCFD +++
Sbjct: 69 LVPYLQLARSNQIGDPIIETELLFAYAKVDMLGELEELVSSPNSARTKEIADRCFDQQLF 128
Query: 231 NAAKLLYNNVSNFARLAITLVHLKEFQGAVDA--------------------GEFRLSQM 350
AAK+LY+ V ++ARLA TL+ LKE Q A+DA G+F+L+Q+
Sbjct: 129 KAAKILYSAVKDYARLAETLIELKELQAAIDAARKASSTKSWMAVLRACIEIGDFKLAQV 188
Query: 351 CGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKPVK 530
GL IV+ AD L ++I Y+D G+F ++I LLEAALGLERAH G+FTELA+LY+K++P K
Sbjct: 189 AGLQIVIEADHLLEVIKLYEDGGYFTQVIGLLEAALGLERAHGGIFTELAVLYAKHQPEK 248
Query: 531 MXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREGHF 710
+HL+ F R+ + V++ + H+W EL + YDKY E+DNA T+++HP+ AW +F
Sbjct: 249 CMDHLKQFNQRIALFKVIKILQAMHMWKELTYAYDKYSEFDNAVTTIIEHPSAAWTHNYF 308
Query: 711 KDIITKVAN 737
K+++ +V+N
Sbjct: 309 KELVAQVSN 317
>UniRef50_Q38KF8 Cluster: Chc1p; n=3; Oligohymenophorea|Rep: Chc1p -
Tetrahymena thermophila
Length = 636
Score = 225 bits (550), Expect = 1e-57
Identities = 105/251 (41%), Positives = 164/251 (65%), Gaps = 20/251 (7%)
Frame = +3
Query: 45 WDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDK 224
+D L++YL MAR+ +++ I++ L++AYA+T ++ DLE FIS N D Q++GDRC+D+K
Sbjct: 77 FDQLIKYLLMARENIKDAQIDNALVFAYAKTEKITDLENFISNSNSVDYQRVGDRCYDEK 136
Query: 225 MYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG--------------------EFRLS 344
Y AAKLL+ N A++A LV LK+FQ A+DA EF+L+
Sbjct: 137 HYEAAKLLFTATKNNAKIASCLVRLKQFQQAIDAAKKANTPKTWKELTMACVEAAEFKLA 196
Query: 345 QMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKP 524
+ GL+I++H D LE+L YY++ G+ +E+ISLLE +GL+RAH+G+FTEL +L +KY+P
Sbjct: 197 AVAGLNIIIHPDHLEELAQYYEEFGYSNEMISLLETGMGLDRAHVGIFTELGVLLAKYRP 256
Query: 525 VKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREG 704
++ EH + ++S++NI +LR E WSE VFL+ Y +YDNA M++H A+
Sbjct: 257 ERLMEHCKQYYSKMNISKLLRVCERYQHWSEAVFLHSNYDQYDNAINIMIEHSPVAFNHD 316
Query: 705 HFKDIITKVAN 737
F +++ K +N
Sbjct: 317 QFVNLLIKASN 327
>UniRef50_A0CHK3 Cluster: Chromosome undetermined scaffold_182, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_182, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1690
Score = 177 bits (430), Expect = 3e-43
Identities = 93/248 (37%), Positives = 144/248 (58%), Gaps = 20/248 (8%)
Frame = +3
Query: 54 LVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDKMYN 233
LV+YL M R+ ++ I++ LIY YA+ + D+E I N AD+ K+G+RC+D ++Y
Sbjct: 1148 LVKYLLMCRQTVKDVNIDNSLIYCYAKLDKNLDVESLIQSSNSADVIKVGERCYDQQLYE 1207
Query: 234 AAKLLYNNVSNFARLAITLVHLKEFQGA--------------------VDAGEFRLSQMC 353
AAK+L+ + N AR+A LV LK+F A V+A EF+ + +
Sbjct: 1208 AAKILFTALKNNARIASCLVRLKQFNKAIEAAQKANTSKTWKELCFACVEASEFKYASIA 1267
Query: 354 GLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKPVKM 533
+I++ D LE LI Y++ +E++ LLE ALG++RAH+G+FTELA+LY YK K+
Sbjct: 1268 AQNIIIVPDMLESLIKQYEEYNAQEEMMILLENALGMQRAHVGIFTELAVLYCHYKQKKV 1327
Query: 534 XEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREGHFK 713
EH ++ ++NI VLR E LWSE V+L+ Y + DNA M++H A+
Sbjct: 1328 MEHCRQYFQKMNILKVLRTCEKMCLWSEAVYLHQHYDQPDNAINIMIEHSPTAFSHDVLV 1387
Query: 714 DIITKVAN 737
++ K+ N
Sbjct: 1388 MLLQKITN 1395
>UniRef50_Q5CW85 Cluster: Clathrin heavy chain; n=2;
Cryptosporidium|Rep: Clathrin heavy chain -
Cryptosporidium parvum Iowa II
Length = 2007
Score = 170 bits (414), Expect = 3e-41
Identities = 90/268 (33%), Positives = 150/268 (55%), Gaps = 26/268 (9%)
Frame = +3
Query: 33 SKXSWDDLVRYLQMARK-----KARESYIESELIYAYARTGRLADLEEFISGPNHADIQK 197
S ++ +L+ YLQM R+ +++ +++EL Y ++ L DL+ F+ G N +QK
Sbjct: 1374 SVKAYRELLGYLQMVRRLKDSRTSKDPIVDTELAYCMSKLELLQDLQSFLQGINTVQLQK 1433
Query: 198 IGDRCFDDKMYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDA----------------- 326
IGDR D++ Y + + Y + N++RL + L E+ A++
Sbjct: 1434 IGDRLMDEQDYRYSIIFYQAIPNYSRLTSCYIQLGEYNNALETAKKANSPKTWKELLQIC 1493
Query: 327 ---GEFRLSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAAL-GLERAHMGMFTE 494
GE L+ GL+I+V+ D ED+++ Y+ +G EL++LLE A+ +RA+ +FTE
Sbjct: 1494 MQIGESELAHQAGLNIIVYPDYCEDVVSEYEKKGLTAELLTLLEGAIQNTDRANGSLFTE 1553
Query: 495 LAILYSKYKPVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMM 674
L ILY+KY P K+ ++ + R+NIP + R E LW+E+V+LY +Y E+D A LT++
Sbjct: 1554 LGILYAKYTPEKLMDYCSSYSGRINIPKLTRICEQRQLWNEVVYLYLQYQEFDQAVLTVI 1613
Query: 675 QHPTEAWREGHFKDIITKVANMGTXLQS 758
HP EAW+ F I+ V N+ +S
Sbjct: 1614 SHPKEAWKNDQFLSILQNVTNVDILYKS 1641
>UniRef50_Q1EQ28 Cluster: Clathrin heavy chain; n=4; cellular
organisms|Rep: Clathrin heavy chain - Entamoeba
histolytica
Length = 1622
Score = 170 bits (413), Expect = 4e-41
Identities = 86/253 (33%), Positives = 151/253 (59%), Gaps = 20/253 (7%)
Frame = +3
Query: 33 SKXSWDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRC 212
S S++DL+ YL M +++ ++ +E+EL+Y YA+ + ++E F+ N A++ I +RC
Sbjct: 1078 SDGSYEDLINYLLMCKEETKDMMVETELLYCYAKLKKNDEIENFLKTANCANLTSIAERC 1137
Query: 213 FDDKMYNAAKLLYNNVSNFARLAITLVHLKEFQGAV--------------------DAGE 332
+++++Y AAK+LY +++N+ +LA L+ LK++ GAV DA E
Sbjct: 1138 YNEELYGAAKILYTSLNNYIKLASCLLKLKDYAGAVEAAKKANSTRTWKEVTFACIDAKE 1197
Query: 333 FRLSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYS 512
F L+Q G++I++ DE+ +L+ YY+ +D++I LLEA L +E H+ MFTELAILYS
Sbjct: 1198 FTLAQETGINILMAGDEITELVYYYEKNELYDQVIELLEAGLKIENVHVSMFTELAILYS 1257
Query: 513 KYKPVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEA 692
KYK K+ ++L+ + +++ V+ W ELVFLY + + A TM+ +P +
Sbjct: 1258 KYKEEKLYDYLKQYVAKIQCQKVIPTVNMNQQWKELVFLYVQVDQV-KAIETMISYPDDC 1316
Query: 693 WREGHFKDIITKV 731
+ K+++ V
Sbjct: 1317 FDHQLMKELLVNV 1329
>UniRef50_A5JZZ8 Cluster: Clathrin heavy chain, putative; n=2;
Plasmodium|Rep: Clathrin heavy chain, putative -
Plasmodium vivax
Length = 1935
Score = 165 bits (400), Expect = 2e-39
Identities = 85/253 (33%), Positives = 147/253 (58%), Gaps = 22/253 (8%)
Frame = +3
Query: 45 WDDLVRYLQMARKK--ARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFD 218
++ L+ YL R + ++ ++SEL+YAYA+ + ++ +FI N A++Q IGDR F
Sbjct: 1383 YEHLITYLNTLRDQNLLKDVLVDSELLYAYAKLKKTTEMTKFIGSTNSANLQLIGDRLFK 1442
Query: 219 DKMYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG--------------------EFR 338
++ Y AK+LY+N+ N +L + LKE+ A++A + +
Sbjct: 1443 EQEYEVAKILYSNIPNNQKLTFCYLKLKEYSLAIEAAKKAKSLKTWKEVNFICVKYKQLK 1502
Query: 339 LSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKY 518
+ GL +++HAD L+++IN Y+ + + +EL+SLLE L ERAH+G++TEL ILY+KY
Sbjct: 1503 HAHTAGLQLIMHADHLDEIINIYEKKKYINELMSLLENGLNSERAHVGIYTELGILYAKY 1562
Query: 519 KPVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWR 698
KP K+ E + + +++N ++ ++ +L E V+LY Y EY+ A T+++H A+
Sbjct: 1563 KPEKLMEFIRNYSNKMNTRKLIDVCQNEYLLKEAVYLYISYDEYNLAVDTIIKHSPTAYT 1622
Query: 699 EGHFKDIITKVAN 737
F +I KV N
Sbjct: 1623 PDTFMQVIHKVTN 1635
>UniRef50_Q8I5L6 Cluster: Clathrin heavy chain, putative; n=10;
Eukaryota|Rep: Clathrin heavy chain, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1997
Score = 161 bits (391), Expect = 2e-38
Identities = 83/253 (32%), Positives = 148/253 (58%), Gaps = 22/253 (8%)
Frame = +3
Query: 45 WDDLVRYLQMARKK--ARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFD 218
++ L+ YL R++ ++ ++SEL+YAYA+ + ++ +FI+ N A++Q IGDR +
Sbjct: 1469 YEHLITYLNTLREQNSLKDVLVDSELLYAYAKLKKTNEMNKFINTTNSANLQLIGDRLYK 1528
Query: 219 DKMYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG--------------------EFR 338
++ Y AK+LY+N+ N +L + LKE+ A++A + +
Sbjct: 1529 EEEYEVAKILYSNIPNNQKLTACYLKLKEYALAIEAAKKAKSLKTWKEVNFICVKYKQLK 1588
Query: 339 LSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKY 518
+ GL +++HAD L+++I Y+ + + +EL++LLE L ERAH+G++TEL ILY+KY
Sbjct: 1589 YAHTAGLQLIMHADHLDEIIKIYEKKKYINELMNLLENGLNNERAHVGIYTELGILYAKY 1648
Query: 519 KPVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWR 698
KP K+ E + + +++N ++ E+ +L E V+LY Y EY+ A T+++H A+
Sbjct: 1649 KPEKLMEFIRNYTNKMNTRKLIDVCENEYLLKEAVYLYISYDEYNLAVDTIIKHSPTAYT 1708
Query: 699 EGHFKDIITKVAN 737
F +I KV N
Sbjct: 1709 ADTFMQVIHKVTN 1721
>UniRef50_Q4Q1R2 Cluster: Clathrin heavy chain, putative; n=10;
Eukaryota|Rep: Clathrin heavy chain, putative -
Leishmania major
Length = 1680
Score = 160 bits (388), Expect = 4e-38
Identities = 84/247 (34%), Positives = 144/247 (58%), Gaps = 22/247 (8%)
Frame = +3
Query: 51 DLVRYLQMARK--KARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDK 224
DL++YL MAR+ +A+++ I++ L+ YA+TGRL +LEEF+ ++ I I D+CF DK
Sbjct: 1166 DLIKYLTMARQCSRAKDNKIDTALVITYAKTGRLEELEEFLKQTHNVKIGAIADKCFQDK 1225
Query: 225 MYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDA--------------------GEFRLS 344
+Y +A++LY +N+AR+A T V L AV+A G+ +L+
Sbjct: 1226 LYESARVLYTVANNYARVASTEVMLNNLPAAVEAAKKAKSIHAYKEANLACIEAGDLKLA 1285
Query: 345 QMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKP 524
+C + +V+ A+E+ + N Y+ RG ++EL S+L A + AHM +FTE+ +L +KY+P
Sbjct: 1286 GVCAVPVVLKAEEVSGMCNRYESRGLWEELFSVLRNASSHQGAHMSIFTEMGVLLAKYRP 1345
Query: 525 VKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREG 704
K+ EH+ ++ ++N ++ E H W L L+ ++ A +MMQH +A+
Sbjct: 1346 EKLMEHVIMYAKKINTHKMITVCEQYHHWVVLRVLHTNNEDWLAATNSMMQHHADAFDHE 1405
Query: 705 HFKDIIT 725
FKD ++
Sbjct: 1406 IFKDAVS 1412
>UniRef50_Q7QTC4 Cluster: GLP_9_31364_35911; n=3; Giardia
intestinalis|Rep: GLP_9_31364_35911 - Giardia lamblia
ATCC 50803
Length = 1515
Score = 104 bits (250), Expect = 2e-21
Identities = 74/277 (26%), Positives = 136/277 (49%), Gaps = 49/277 (17%)
Frame = +3
Query: 54 LVRYLQMAR-------KKARESYIESELIYAYARTGRLADLEEFISG---------PNHA 185
L+ YL+MAR + + ++ I++ ++Y AR L EF+ PN
Sbjct: 986 LLEYLRMARVVVAQKGETSSQAEIDTAVMYCLARLDDYGALSEFLESVNPRDSTVIPNRG 1045
Query: 186 DIQKIGDRCFDDKMYNAAKLLYNNVSNFARLAITLVHLKEFQGAVDAG------------ 329
I+++G++CF ++ Y AAK + V +++RL++TLV L+ + AV+A
Sbjct: 1046 GIKEVGEKCFAEEHYKAAKYFFEFVGDWSRLSLTLVKLRCLKEAVEAATRAADPECWKAV 1105
Query: 330 --------EFRLSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERA---- 473
+F L++ L++V+ EL ++ YY++ G +EL+ +LEA +A
Sbjct: 1106 AAECLEIRDFELAKSVFLNLVLVESELPSIVQYYEEYGFIEELLEVLEAGAEQPQAATYT 1165
Query: 474 --HMGMFTELAILYSKYK-------PVKMXEHLELFWSRVNIPXVLRAAEHAHLWSELVF 626
+FT LAILY KY P ++ +++ ++++IP +L LW E +
Sbjct: 1166 SMETNIFTILAILYCKYMWIVRKTDPQRLQTYIKTHGNKIHIPTLLHWTRETRLWGEYAY 1225
Query: 627 LYDKYXEYDNAALTMMQHPTEAWREGHFKDIITKVAN 737
L ++D A + M+ HP ++ K +I +V+N
Sbjct: 1226 LLAASRDFDKAVVEMIAHPPSSFNHDVMKKVIGRVSN 1262
>UniRef50_A2GL34 Cluster: Clathrin and VPS domain-containing
protein; n=1; Trichomonas vaginalis G3|Rep: Clathrin and
VPS domain-containing protein - Trichomonas vaginalis G3
Length = 838
Score = 99.5 bits (237), Expect = 9e-20
Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Frame = +3
Query: 54 LVRYLQMARK-KARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDKMY 230
LV YLQ+AR + + IE+EL++AYA+ L +LEE +S PN A ++I DRCFD +++
Sbjct: 712 LVPYLQLARSNQIGDPIIETELLFAYAKVDMLGELEELVSSPNSARTKEIADRCFDQQLF 771
Query: 231 NAAKLLYNNVSNFARLAITLVHLKEFQGAVDA 326
AAK+LY V ++ARLA TL+ LKE Q A+DA
Sbjct: 772 KAAKILYTAVKDYARLAETLIELKELQAAIDA 803
>UniRef50_A7AVF3 Cluster: Clathrin heavy chain; n=1; Babesia
bovis|Rep: Clathrin heavy chain - Babesia bovis
Length = 1676
Score = 89.0 bits (211), Expect = 1e-16
Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 26/238 (10%)
Frame = +3
Query: 75 ARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDKMYNAAKLLYN 254
A KK+R+ ++++ + A G + +E ++G + AD+ +G + + + Y A L+Y+
Sbjct: 1206 ALKKSRD--LDTDYLLCLADRGDIDKFKEVLNGQHSADVGYVGSKLMESRKYREAVLIYS 1263
Query: 255 NVSNFARLAITLVHLKEFQGAVDA------------------GEFRL--SQMCGLHIVVH 374
++ NFA+LA+ +HL EF A DA G+ +L + + ++ +
Sbjct: 1264 SIPNFAKLALCHLHLGEFYQAADAALNSRNPQVLRQVVEECVGKNQLGTAHKVAIELLTY 1323
Query: 375 ADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKPVKMXEHLELF 554
D L ++ Y+ G+ +ELI LLE + + + TELAI +KYKP ++ H +
Sbjct: 1324 PDFLPGIVTLYETTGNTNELIKLLEKS----APSVAVSTELAIAIAKYKPEELMNHFKTN 1379
Query: 555 WSR------VNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREGHF 710
++ +N V R + LW E V+LY D A ++M+ H AW E F
Sbjct: 1380 FTTEELLVCINTARVARECCNLWLWQEAVYLY-SLDTPDTALISMIAHYGLAWDEKLF 1436
>UniRef50_Q4UBV3 Cluster: Clathrin heavy chain, putative; n=1;
Theileria annulata|Rep: Clathrin heavy chain, putative -
Theileria annulata
Length = 2068
Score = 61.3 bits (142), Expect = 3e-08
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Frame = +3
Query: 336 RLSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSK 515
+L G+ ++ + + L ++ Y+ G FD+LI LL + TELAI +K
Sbjct: 1724 KLLNRVGIELLNYPEFLVSVVASYESMGLFDDLIELLRNTTKT----VATSTELAICIAK 1779
Query: 516 YKPVKMXEHLE--LFWSR-VNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPT 686
Y P ++ EHL F S +NI R + LW E VFLY + D A L+M+ HP
Sbjct: 1780 YHPEELMEHLRNVAFESNSLNISKTARECSNLWLWREAVFLY-TIDDSDKAILSMILHP- 1837
Query: 687 EAWREGHFKDIITKVAN 737
E + E F + V+N
Sbjct: 1838 ECFEEQLFFRTLANVSN 1854
>UniRef50_Q4MZN7 Cluster: Clathrin heavy chain, putative; n=1;
Theileria parva|Rep: Clathrin heavy chain, putative -
Theileria parva
Length = 1696
Score = 60.1 bits (139), Expect = 6e-08
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Frame = +3
Query: 315 AVDAGEFRLSQMCGLHIVVHADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTE 494
+VD ++ G ++ + + L +++ Y+ G FD+LI LL + TE
Sbjct: 1341 SVDLTARQMLNRLGSELLNYPEFLVSIVSSYESMGFFDDLIELLRNTTKT----VATSTE 1396
Query: 495 LAILYSKYKPVKMXEHLE--LFWSR-VNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAAL 665
LAI +KY P + EHL F S +NI R + LW E VFLY + D A L
Sbjct: 1397 LAICIAKYHPELLMEHLRNVAFESNSLNISKTARECSNLWLWKEAVFLY-TIDDSDKAIL 1455
Query: 666 TMMQHPTEAWREGHFKDIITKVAN 737
+M HP E + + F + V+N
Sbjct: 1456 SMTLHP-ECFEQDLFFRTLNNVSN 1478
>UniRef50_Q59M81 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 108
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = -1
Query: 518 VF*IQDGEFGEHSHVSSLQP*GSF*QADQLVKVTSVLVVIDEVFKFVSMYYNVQSTHLRE 339
VF IQD +FGEH+HVSS Q +++Q V++T V V +D+ +F S+ +Q+T+L +
Sbjct: 9 VFSIQDSQFGEHTHVSSFQTQPILEKSNQFVEITIVFVSLDQFRQFFSIDNQIQTTNLSQ 68
Query: 338 SK-FTGVHSTLKFFQMHQSNSKTSEVADVVI 249
S+ F ST+ F S +S V ++
Sbjct: 69 SELFVFNTSTVNLFPNLSVRSFSSTVNSTLV 99
>UniRef50_UPI00006CCA37 Cluster: hypothetical protein
TTHERM_00281010; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00281010 - Tetrahymena
thermophila SB210
Length = 372
Score = 35.1 bits (77), Expect = 2.1
Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +3
Query: 24 LLPSKXSWDDLVRYLQMARKKARESYIESELIYAYART-GRLADLEEFISGPNHADIQKI 200
LL + WDD +Y+ + + Y + E ++++ + + PN ++K
Sbjct: 114 LLEIQLQWDDFQKYVNSKSQNGKAYYEQLENGFSFSSDQNQYIFFKSNEKKPNDYSVEKY 173
Query: 201 GDRCFDDKMYNAAKLLYNNVSNFARLAITLVHLKE 305
+DD+ Y + L Y+N+ + + TL L +
Sbjct: 174 PYHFYDDRKYAISALTYDNILFYKQFLKTLEKLNQ 208
>UniRef50_Q4TE15 Cluster: Chromosome 7 SCAF5879, whole genome
shotgun sequence; n=4; Tetraodon nigroviridis|Rep:
Chromosome 7 SCAF5879, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 330
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1
Query: 742 ELXYKAXQFYLXYKPLLLN 798
EL YKA QFYL +KPLLLN
Sbjct: 6 ELYYKAVQFYLEFKPLLLN 24
>UniRef50_A0EZ22 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 905
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 144 LADLEEFISGPNHADIQ-KIGDRCFDDKMYNAAKLLYNNVSNFARLAITLVHLKEFQGAV 320
+A+L F+ GP + + + D D MYN +YNNV NF A T K A+
Sbjct: 259 MANLNHFVVGPFNVSVHHNVRDAYVIDAMYNETLFVYNNVVNF--FARTGAQFKYKDDAI 316
Query: 321 D 323
D
Sbjct: 317 D 317
>UniRef50_UPI0000DB7242 Cluster: PREDICTED: similar to CG31160-PA;
n=2; Apocrita|Rep: PREDICTED: similar to CG31160-PA -
Apis mellifera
Length = 882
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 TRGTLSLLLPSKXSW--DDLVRYLQMARKKARESYIESELIYA 125
TRG L L LP+K DDLV LQ+ +K RE+ + +YA
Sbjct: 712 TRGILCLALPTKTPLFEDDLVEILQVIQKNVREARSKQSALYA 754
>UniRef50_A6WES2 Cluster: Histidine kinase HAMP region domain
protein precursor; n=2; Bacteria|Rep: Histidine kinase
HAMP region domain protein precursor - Kineococcus
radiotolerans SRS30216
Length = 733
Score = 34.3 bits (75), Expect = 3.6
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Frame = +3
Query: 375 ADELEDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELA---ILYSKYKPVKMXEHL 545
A + +L+ Y ++ ++D I ++ L+ +G+ LA + + Y V+
Sbjct: 46 AQDAAELVQYVTEQKYYDADIIGWQSGYALDTYRLGVDAALADDNVNRAGYLAVRST--- 102
Query: 546 ELFWSRVNIPXVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTEAWREGHFKD 716
L + N P L A+ L +EL+ L+D++ ++DN A+ + A E H +
Sbjct: 103 -LVAALQNAPLELMTAQERTLNAELIGLWDQFIDFDNRAVVAYRDGRTADAEKHLDE 158
>UniRef50_UPI0000588D00 Cluster: PREDICTED: similar to NACHT domain
protein, putative; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to NACHT domain
protein, putative - Strongylocentrotus purpuratus
Length = 204
Score = 33.9 bits (74), Expect = 4.8
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 285 TLVHLKEFQGAVDAGEFRLSQMCGLHIVVH-ADELEDLINYYQDRGHFDELISLLEAAL 458
TL+ L +G VD + L +H V+ D+ ED Y +R ++DE+++L+E L
Sbjct: 116 TLLQLALIKGHVDIAKILLQNGVDVHHVMKWEDQSEDTALSYAERMNYDEIVTLIEERL 174
>UniRef50_Q8F7D6 Cluster: Putative outermembrane protein; n=4;
Leptospira|Rep: Putative outermembrane protein -
Leptospira interrogans
Length = 519
Score = 33.9 bits (74), Expect = 4.8
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 612 SELVFLYDKYXEYDNAALTMMQHPTEAWREGHFKDIITKVAN 737
S L FLY+KY +Y A L M++ ++G + I+T++AN
Sbjct: 60 SRLFFLYEKYRKYIPAILIMIRSGKITNKKGKYPAIVTELAN 101
>UniRef50_Q7QVF8 Cluster: GLP_90_9890_12910; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_90_9890_12910 - Giardia lamblia ATCC
50803
Length = 1006
Score = 33.9 bits (74), Expect = 4.8
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 6 RGTLSLLLPSKXSWDDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFI 167
+G +L++ ++ W D+VR L + R+ + + LIYA + GR + ++E +
Sbjct: 734 KGVTALMIAAECGWVDIVRTLMPREARLRDDFGNTALIYA-CKAGRASVVQELL 786
>UniRef50_Q54I78 Cluster: Valyl tRNA synthetase; n=1; Dictyostelium
discoideum AX4|Rep: Valyl tRNA synthetase -
Dictyostelium discoideum AX4
Length = 1064
Score = 33.5 bits (73), Expect = 6.3
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 186 DIQKI-GDRCFDDKMYNAAKLLYNNVSNFARLAITLVH 296
DI KI G+R F +K++NA+K ++N + N L+I L +
Sbjct: 696 DISKIIGNRLFCNKLWNASKFVFNYLVNLNNLSINLYY 733
>UniRef50_A3MY54 Cluster: Putative uncharacterized protein; n=1;
Pyrobaculum calidifontis JCM 11548|Rep: Putative
uncharacterized protein - Pyrobaculum calidifontis
(strain JCM 11548 / VA1)
Length = 369
Score = 33.1 bits (72), Expect = 8.4
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 387 EDLINYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKPVKMXEHLE 548
+D + Y DR +DELI++L+A + R+ G++ L L K + + +HL+
Sbjct: 313 KDGVPYPVDRKVYDELIAILDAIIDKARSDPGIYKYLTHLAKKAESWQFPDHLK 366
>UniRef50_Q7VR84 Cluster: Protein tolB precursor; n=3;
Enterobacteriaceae|Rep: Protein tolB precursor -
Blochmannia floridanus
Length = 460
Score = 33.1 bits (72), Expect = 8.4
Identities = 23/98 (23%), Positives = 44/98 (44%)
Frame = +3
Query: 396 INYYQDRGHFDELISLLEAALGLERAHMGMFTELAILYSKYKPVKMXEHLELFWSRVNIP 575
I + + + +++ S++ A L + G F L I Y Y+P K+ + + FW ++ I
Sbjct: 49 ITHELNNDNIEDIASIIAADL----RNSGKFNTLPIAYLPYQPSKLTDIIPTFWEKLGIN 104
Query: 576 XVLRAAEHAHLWSELVFLYDKYXEYDNAALTMMQHPTE 689
V+ A + V Y +N AL ++ + E
Sbjct: 105 TVVLGAINIKN-ENYVISYQLIDTSNNPALVILDNQYE 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,652,298
Number of Sequences: 1657284
Number of extensions: 13473880
Number of successful extensions: 35129
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35066
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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