Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0180
         (550 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding prote...    44   3e-04
BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding prote...    44   3e-04
AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding prot...    44   3e-04
AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein N...    44   3e-04

>BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 222 QYEKRRAHLISYYESVKHAQSVQLDDIXLPAI-QVPDNILYNTAPPXQIPLPADITQAPX 398
           +YE++RA L  Y+++VK+AQ V+++ I LP +   P NIL        IPLP    Q P 
Sbjct: 113 EYEQKRAQLSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQ-----DIPLPG--AQPP- 164

Query: 399 GXVKSILKKETIY 437
               SILKK + Y
Sbjct: 165 ----SILKKTSAY 173



 Score = 36.3 bits (80), Expect = 0.071
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +1

Query: 55  KLMKWXFNVLQPSPLNEKVLKAQXKKTQGKLLTXVLKMYDKDEP 186
           KL +  FN +Q   LNEKVLK + KK + +    +L++Y+K+ P
Sbjct: 59  KLDEMEFNPVQQPQLNEKVLKDKRKKLR-ETFERILRLYEKENP 101


>BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 222 QYEKRRAHLISYYESVKHAQSVQLDDIXLPAI-QVPDNILYNTAPPXQIPLPADITQAPX 398
           +YE++RA L  Y+++VK+AQ V+++ I LP +   P NIL        IPLP    Q P 
Sbjct: 113 EYEQKRAQLSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQ-----DIPLPG--AQPP- 164

Query: 399 GXVKSILKKETIY 437
               SILKK + Y
Sbjct: 165 ----SILKKTSAY 173



 Score = 36.3 bits (80), Expect = 0.071
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +1

Query: 55  KLMKWXFNVLQPSPLNEKVLKAQXKKTQGKLLTXVLKMYDKDEP 186
           KL +  FN +Q   LNEKVLK + KK + +    +L++Y+K+ P
Sbjct: 59  KLDEMEFNPVQQPQLNEKVLKDKRKKLR-ETFERILRLYEKENP 101


>AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding protein
           SNP70 protein.
          Length = 641

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 222 QYEKRRAHLISYYESVKHAQSVQLDDIXLPAI-QVPDNILYNTAPPXQIPLPADITQAPX 398
           +YE++RA L  Y+++VK+AQ V+++ I LP +   P NIL        IPLP    Q P 
Sbjct: 113 EYEQKRAQLSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQ-----DIPLPG--AQPP- 164

Query: 399 GXVKSILKKETIY 437
               SILKK + Y
Sbjct: 165 ----SILKKTSAY 173



 Score = 36.3 bits (80), Expect = 0.071
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +1

Query: 55  KLMKWXFNVLQPSPLNEKVLKAQXKKTQGKLLTXVLKMYDKDEP 186
           KL +  FN +Q   LNEKVLK + KK + +    +L++Y+K+ P
Sbjct: 59  KLDEMEFNPVQQPQLNEKVLKDKRKKLR-ETFERILRLYEKENP 101


>AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein
           NpwBP protein.
          Length = 641

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 222 QYEKRRAHLISYYESVKHAQSVQLDDIXLPAI-QVPDNILYNTAPPXQIPLPADITQAPX 398
           +YE++RA L  Y+++VK+AQ V+++ I LP +   P NIL        IPLP    Q P 
Sbjct: 113 EYEQKRAQLSQYFDAVKNAQHVEVESIPLPDMPHAPSNILIQ-----DIPLPG--AQPP- 164

Query: 399 GXVKSILKKETIY 437
               SILKK + Y
Sbjct: 165 ----SILKKTSAY 173



 Score = 36.3 bits (80), Expect = 0.071
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = +1

Query: 55  KLMKWXFNVLQPSPLNEKVLKAQXKKTQGKLLTXVLKMYDKDEP 186
           KL +  FN +Q   LNEKVLK + KK + +    +L++Y+K+ P
Sbjct: 59  KLDEMEFNPVQQPQLNEKVLKDKRKKLR-ETFERILRLYEKENP 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,123,756
Number of Sequences: 237096
Number of extensions: 1070972
Number of successful extensions: 2080
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2080
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)