Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0179
(484 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 152 5e-36
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 142 3e-33
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 134 1e-30
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 123 2e-27
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 114 1e-24
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 71 2e-11
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 69 7e-11
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 66 4e-10
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 57 2e-07
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 46 6e-04
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 45 8e-04
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 44 0.002
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 38 0.16
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 35 1.1
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 34 1.9
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 3.4
UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;... 32 5.9
UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG240... 32 7.8
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 32 7.8
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 152 bits (368), Expect = 5e-36
Identities = 71/142 (50%), Positives = 86/142 (60%)
Frame = +3
Query: 18 KTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKN 197
KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++N
Sbjct: 7 KTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRN 66
Query: 198 KNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXX 377
++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQPVIV
Sbjct: 67 QSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKA 126
Query: 378 XXXXXXXXXXXXDVGGACVLSA 443
VGGACVL A
Sbjct: 127 KFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 142 bits (345), Expect = 3e-33
Identities = 67/115 (58%), Positives = 76/115 (66%)
Frame = +3
Query: 99 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 278
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+LVSE+TR YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 279 PDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 443
D K PVI++VKA PKQPVIV VGGAC+L A
Sbjct: 80 KD-KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 134 bits (323), Expect = 1e-30
Identities = 70/144 (48%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Frame = +3
Query: 18 KTRKLRGHVSXXXXXXXXXXXXXXXXXN--AGGEHHHRINMDKYHPGYFGKLGMRNFHFR 191
KTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGMR FH +
Sbjct: 7 KTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHLK 66
Query: 192 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 371
KN CPV+N+DKLW+LVS+ TR KYA KVPVI++ KA P QPV+V
Sbjct: 67 KNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLPNQPVVV 125
Query: 372 XXXXXXXXXXXXXXDVGGACVLSA 443
VGGACVL+A
Sbjct: 126 KAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 123 bits (297), Expect = 2e-27
Identities = 61/143 (42%), Positives = 77/143 (53%)
Frame = +3
Query: 15 NKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 194
+K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH K
Sbjct: 57 HKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFHKLK 116
Query: 195 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 374
N+ CP +N+DKLWTLV + R + A + PVI++ P QPV+V
Sbjct: 117 NQTVCPTINIDKLWTLVGTEKREECAK-NTSQAPVIDLTDHGIFKLLGKGQLPNQPVVVK 175
Query: 375 XXXXXXXXXXXXXDVGGACVLSA 443
+VGGAC+L+A
Sbjct: 176 CRYISKLAEKKIKEVGGACILTA 198
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 114 bits (274), Expect = 1e-24
Identities = 62/146 (42%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Frame = +3
Query: 9 AKNKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHF 188
A K RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR FH
Sbjct: 4 ALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHK 63
Query: 189 RKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPK-QPV 365
+NK FCP++NLDKLW+LV E + K S+ D VP+I++ + P+ +P
Sbjct: 64 LRNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDVTQHGFFKVLGKGHLPENKPF 120
Query: 366 IVXXXXXXXXXXXXXXDVGGACVLSA 443
+V + GGA VL+A
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 70.5 bits (165), Expect = 2e-11
Identities = 39/146 (26%), Positives = 66/146 (45%)
Frame = +3
Query: 3 TXAKNKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 182
T KTRKLRGHVS AGG H + ++HP Y GK GMR +
Sbjct: 2 TDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRVY 61
Query: 183 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQP 362
H ++N ++ ++ +LW ++ ++ R + P+ KVPVI++ + ++P
Sbjct: 62 HRKENSDYARPISSARLWGMIPKEQRYDFLDNPE-KVPVIDVREFGYHVVVGGKLSLERP 120
Query: 363 VIVXXXXXXXXXXXXXXDVGGACVLS 440
++V VGG +++
Sbjct: 121 IVVKARYFTPSAKEEITKVGGKWIIT 146
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 68.5 bits (160), Expect = 7e-11
Identities = 39/112 (34%), Positives = 53/112 (47%)
Frame = +3
Query: 108 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDG 287
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV + R K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 288 KVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 443
+VPVI+ + A P P IV + GG L A
Sbjct: 136 EVPVIDTLAAGYGKVLGKGRLPALPCIVKARWVSSLAEKKIKEAGGVVKLVA 187
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +3
Query: 15 NKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 149
+KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 6 SKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 66.1 bits (154), Expect = 4e-10
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +3
Query: 18 KTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKN 197
++RK RGHVS N+GG+HHH+I +KYH +FGK GMR + K
Sbjct: 7 RSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRYYRKLKQ 66
Query: 198 KNFCPVLNLDKL 233
NF +NLDK+
Sbjct: 67 NNFNKSINLDKI 78
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.2 bits (132), Expect = 2e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +3
Query: 135 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 245
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 18 KTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKN 197
K+RK+RG S +GG+HHH+I ++Y YF K GMR ++ K
Sbjct: 7 KSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRIYNLEKT 66
Query: 198 KN 203
N
Sbjct: 67 LN 68
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 45.2 bits (102), Expect = 8e-04
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -3
Query: 329 LVVSSFDNIDDGDLAIWSRC-ILQPRLFRD*CPKLI*VQNWTEILVLSKVEISHTKFAKV 153
L V+ ++++ + SR +L +F D CP+ + VQ+W + L VE+SHT ++
Sbjct: 42 LTVTGCQSVNNWSSFLRSRFQVLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEI 101
Query: 152 SRMVLVHVDXXXXXXXXXXXXXXXXXVLSDTTMS 51
+ MV +HV+ VL+DTT +
Sbjct: 102 TWMVFIHVNSVVMLTTGHTSTTGVLSVLTDTTFT 135
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 117 HHRINMDKYHPGYFGK--LGMRNFHFRKNKNFCPVLNLDKLWTLV 245
H R + PG G +GMR FH +NK +C ++NLDKLW++V
Sbjct: 19 HGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV 63
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 37.5 bits (83), Expect = 0.16
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3
Query: 18 KTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 152
KTRK +GHVS NAGGEH HRIN PG
Sbjct: 7 KTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 34.7 bits (76), Expect = 1.1
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 99 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 278
NAG + H +++ K++P YFGK G N+N C + L+ + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
Query: 279 ---PDGKVPV 299
+GKV V
Sbjct: 89 FQVEEGKVVV 98
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 33.9 bits (74), Expect = 1.9
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 433 TQAPPTSLIFFSADFEKNFAFTMTGCLGSLPL 338
T A SL FFS D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 134 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 223
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;
n=7; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 656
Score = 32.3 bits (70), Expect = 5.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 201 NFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 293
NFCP L D WT++S+ + Y S+PD V
Sbjct: 116 NFCPWLEED--WTMLSDDSTTPYESSPDNSV 144
>UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG24039;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24039 - Caenorhabditis
briggsae
Length = 991
Score = 31.9 bits (69), Expect = 7.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 RINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLD-KLWTLVSEQ 254
++ D+Y Y G L + FHF K C + +LD K WT++++Q
Sbjct: 894 KVLADRYKQ-YNGMLKEKKFHFDKLFEICKLTDLDKKQWTILNDQ 937
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.9 bits (69), Expect = 7.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 207 RNSCSF*SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 70
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,352,529
Number of Sequences: 1657284
Number of extensions: 7837513
Number of successful extensions: 19419
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 18753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19401
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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